Pairwise Alignments

Query, 390 a.a., Benzoate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 415 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 87.0 bits (214), Expect = 9e-22
 Identities = 86/374 (22%), Positives = 154/374 (41%), Gaps = 14/374 (3%)

Query: 4   RTARLALTAIAFAALASAAGAQGTGK-LKVGLMLPYSGTYTALGV----AIENGFKLYVD 58
           RT    L A     +AS A  +     +++G   P +G + A       + E   KL V+
Sbjct: 15  RTVLAGLGAAGVGLIASPAIVRAQADTIRIGFPTPLTGPFGAEAKDQVKSAELAVKL-VN 73

Query: 59  EQGGKLAGREIEYFKVDDESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAKES 118
           ++GG +AGR++E    DD+ +  +A     +LI++D V  +VG + S V +A+ +  +  
Sbjct: 74  DKGG-IAGRKVELLVRDDKLNAGEAATRTLELIEKDKVHAVVGALSSAVQLAVNEVTRAR 132

Query: 119 GTVLIVPNAGADAVTGPMCAPNIFRSSFSNWQPAYAMGEVAAKQQGKKKAMTITWKYAAG 178
           G + +  +           +   F  + +      A+     K +G K A+ +   YA G
Sbjct: 133 GVIYVSISQSDTINEVKDFSKYTFHEALNPHMTTAAVARATFK-KGSKVAL-LGADYAYG 190

Query: 179 DESVNGFKEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGGGAVKFVK 238
            E + GFK    + G ++  ++  PF   ++  L+  I + KPD +     G      +K
Sbjct: 191 HEMMRGFKRAAGELGAEIVGEILHPFGAADYSTLMPRIRSLKPDILAICNFGRDQANSIK 250

Query: 239 DYQAAGLNKTIPLYGPGFLTDGTLDAQGESAQGMLTTLHYADGLNT--PRDNAFRTAYAK 296
                G+ K + +  P  L +  +    +  +G++   +Y   L    P   AF  AY  
Sbjct: 251 QANDFGMKKQMQIVVPVLLHNQRIAVAPDVFEGIIGGANYYWALENTIPSAKAFNDAYKA 310

Query: 297 SFKLQPDVYAVQGYDAAQMLGVGLNATKGDISKKAEFAAAVEKAKIDSPRGAFTVSK-SH 355
           ++   P  Y   G+     L + +    G  + K     A+E  K D  +G     K  H
Sbjct: 311 AYGSLPTDYGAYGFTGVSALLLAMAKAGGTDTDKV--VEALEGLKYDVAKGPQYFRKCDH 368

Query: 356 NPVQDIYLRKVDGK 369
             VQ + + K   K
Sbjct: 369 QSVQSVLVLKSKAK 382