Pairwise Alignments

Query, 390 a.a., Benzoate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 391 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  124 bits (310), Expect = 6e-33
 Identities = 102/384 (26%), Positives = 178/384 (46%), Gaps = 18/384 (4%)

Query: 3   IRTARLALTAIAFAALASAAGAQGTGKLKVGLMLPYSGTYTALGVAIENGFKLYVDEQGG 62
           +R   L L A A  A  +   A+    L++G++  +SG Y   G   + G  +++     
Sbjct: 1   VRRRTLGLLAGALVAAPALVFAR-VRPLRIGVIGSWSGPYAGGGRQFDAGMAVWLAAHNH 59

Query: 63  KLAGREIEYFKVD-DESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAKESGTV 121
            +AGR +E  + D   S P +A  +   L++ + VD++ G   S  A A+   A ++   
Sbjct: 60  HIAGRPVELLRRDVPGSAPDQARRHAQDLVESEKVDLLSGLDFSSNAYAVGAVAAQARMP 119

Query: 122 LIVPNAGADAVTGPMCAPNIFRSSFSNWQPAYAMGEVAAKQQGKKKAMTITWKYAAGDES 181
           LIV NA +  +T     P   R SF+  Q    +   A  QQG +   T+   YA+G ++
Sbjct: 120 LIVMNAASSGITAR--CPFAVRVSFTIAQVTLPLARWAL-QQGLRDVCTVVADYASGVDA 176

Query: 182 VNGFKEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGG----GAVKFV 237
            + F  G    GG+V   L +P   +++ A +  +   KP AV+ F   G    G +KF 
Sbjct: 177 ESAFVSGITAGGGRVGAMLRVPLATLDYSAYMLRLRELKPQAVFFFLPSGQMPAGFLKFW 236

Query: 238 KDYQAAGLNKTIPLYGPGFLTDGT-LDAQGESAQGMLTTLHYADGLNTPRDNAFRTAYAK 296
           +D   A  +  I L   G  TD   L   GE A G++T+ HY+    +  +  F   +  
Sbjct: 237 RDRGMA--DTGIRLLSTGDATDDNYLQGIGELADGLVTSHHYSFAHESTANRRFTGVFET 294

Query: 297 SF--KLQPDVYAVQGYDAAQMLGVGLN--ATKGDISKKAEFAAAVEKAKIDSPRGAFTV- 351
            +   L+P  +AV  +DA   +   ++  A +G+   +     A    K+DSPRG   + 
Sbjct: 295 EYGSHLRPGYFAVAAHDALAAIDAAMSSPAARGNAGGE-RLVDAFRGLKLDSPRGPLEID 353

Query: 352 SKSHNPVQDIYLRKVDGKENKLVS 375
           + + + VQ +Y+R+V+ +  + ++
Sbjct: 354 AHTRDVVQTVYIRRVERQGGRWIN 377