Pairwise Alignments

Query, 390 a.a., Benzoate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 85/367 (23%), Positives = 149/367 (40%), Gaps = 12/367 (3%)

Query: 2   TIRTARLALTAIAFAALASAAGAQGTGKLKVGLMLPYSGTYTALGVAIENGFKLYVDEQG 61
           T+  A LAL A+    L +            GL    SG + + G   + G +L + E  
Sbjct: 5   TLLKAGLALGALGSLPLGAHRAFADQPLTFYGLK-SMSGAFASYGKYADMGSRLAIAEHP 63

Query: 62  GKLAGREIEYFKVDDESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAKESGTV 121
            +L G  ++Y  +D E +  KA   V + I +D      G   S  A+A++K   ++G V
Sbjct: 64  -QLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGV 122

Query: 122 LIVPNAGADAVTGPMCAPNIFRSSFSNWQPAYAMGEVAAKQQGK-KKAMTITWKYAAGDE 180
            + P  GAD +TG  C  + FR S   +          ++Q  + K+  TIT +Y  GD 
Sbjct: 123 FMTP-VGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDA 181

Query: 181 SVNGFKEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGGGAVKFVKDY 240
            ++  ++ F + G +            EF   LT   AAKPD +     G  A   ++  
Sbjct: 182 LLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQA 241

Query: 241 QAAGLN---KTIPLYGPGFLTDGTLDAQGESAQGMLTTLHYADGLNTPRDNAFRTAYAKS 297
              G+    K + ++  G   D   +   +  +G+     Y   ++TP +     A  K+
Sbjct: 242 VNFGIKDRMKVLMVWSAGL--DQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRKA 299

Query: 298 FKLQPDVYAVQGYDAAQMLGVGLNATKGDISKKAEFAAAVEKAKIDSPRGAFTVSK-SHN 356
           + + P+      Y   +++   +   K      A  +AA++  +   P G   +    H 
Sbjct: 300 YGINPNYPLAADYIGTKVMLEAI--VKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQ 357

Query: 357 PVQDIYL 363
            ++D YL
Sbjct: 358 VLKDYYL 364