Pairwise Alignments

Query, 390 a.a., Benzoate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 397 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  110 bits (274), Expect = 9e-29
 Identities = 105/374 (28%), Positives = 159/374 (42%), Gaps = 29/374 (7%)

Query: 5   TARLALTAIAFAALASAAGAQGTGKLKVGLMLPYSGTYTALGVAIENG---FKLYVDEQG 61
           T +L   A+  A L +AA AQ   K+++G     S  Y+   V  +NG    ++ +D+ G
Sbjct: 4   TVKLLTLALGTAGLLTAAHAQD--KVRIGFTTDMSSLYS--DVDGKNGAMAIQMAIDDFG 59

Query: 62  GKLAGREIEYFKVDDESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAKESGTV 121
           GK+ G+ IE    D ++    A     + I   N+DV++G  +SG A+A AK A+E   +
Sbjct: 60  GKVLGKPIELLSADHQNKADIAASKAREWIDTQNLDVMIGGTNSGTALATAKVAEEKKKL 119

Query: 122 LIVPNAGADAVTGPMCAPNIFRSSFSNWQPAYAMGEVAAKQQGKKKAMTITWKYAAGDES 181
            IV  AG+ A+T   C+P     ++     A   G    K QG K    +T  YA G   
Sbjct: 120 YIVNGAGSSALTNAACSPYTVHYAYDTVALAKGTGGAVVK-QGGKDWFFLTADYAFGHAL 178

Query: 182 VNGFKEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGGGAVKFVKDYQ 241
                   +  GG V   +  P    +F + L +  ++    +    AGG  +  +K   
Sbjct: 179 ETDTANVVKGAGGTVKGAVRAPLNTSDFSSFLLQAQSSGAKILGLANAGGDTIASIKAAS 238

Query: 242 AAGLNKTIPLYG-PGFLTD----GTLDAQGESAQGMLTTLHYADGLNTPRDNAFRTAYAK 296
             G+ KT+ L G   F+TD    G  D QG         ++  D     +D+A R A+AK
Sbjct: 239 EFGITKTMKLAGLLMFVTDIHSLGLKDTQG---------MYLTDSWYWDKDDASR-AFAK 288

Query: 297 SF----KLQPDVYAVQGYDAAQMLGVGLNATKGDISKKAEFAAAVEKAKIDSPRGAFTVS 352
            F    K  P       Y A       + A K   S K    A ++  KID   G  T+ 
Sbjct: 289 KFFEKAKRMPTSIQAANYSATTTYLKAVTAAKTTDSDKV--MAQLKSMKIDDFFGKGTIR 346

Query: 353 KSHNPVQDIYLRKV 366
                V D+YL +V
Sbjct: 347 PDGRYVHDMYLLEV 360