Pairwise Alignments

Query, 641 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Variovorax sp. SCN45

Subject, 641 a.a., sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens GW456-L13

 Score =  288 bits (737), Expect = 5e-82
 Identities = 201/538 (37%), Positives = 283/538 (52%), Gaps = 32/538 (5%)

Query: 110 DQLRKAGLY---LGADWNEAHAGTCGVGTCLVERQPMTCHQTEHFDATHIALTCTTAPLF 166
           D+L+ +GL    LG  W+EA  GT  +GT LVE +P      EH+       +CT+ P+ 
Sbjct: 120 DRLKGSGLQDITLGTCWSEAVRGTNALGTALVEARPTLIDCGEHYLDRLSDFSCTSVPIH 179

Query: 167 DHSGKLTAILDVSALRSPEAKESQHLVRHLVSMYARMIEDADFLRNFRGHWILRLGSAFG 226
              G +  +LD++    P  +   H    L++M    IE   F  ++    +L   S   
Sbjct: 180 CPQGDILGVLDLTR-EGPLGRA--HDSTALLAMAVSQIESRVFNASYPDEIVLAFHSRRQ 236

Query: 227 LVDVAGEVMLAFDDGGTLAGANGGARQAFAGHALSGAV-----SELLHMP-MDAIWRIGN 280
            ++   + +LA   GG +   +  A Q    HA   A+      E L +  +  + R+  
Sbjct: 237 YLESPWQGLLAVSLGGQILAVSAQACQLL--HAERSALVGRRCEEFLGVDGLQLLARLHQ 294

Query: 281 GGAISPLMPFAHTVLLPGGGEYHASLIAPRSRRAQAPATAAPSARPSDRLPPLERIAGDD 340
           GGA S         L    GE+    +    R     +     A+P+   P LE +AG +
Sbjct: 295 GGAGS---------LQTAKGEFFYKTLRAPQRSINVSSPPRTVAKPAKAQPDLEALAGSN 345

Query: 341 PAMQKLLAQARRLVDRGIHVLVEGETGSGKEVLARALHSASSRAAMPFVAVNCAAIPDSL 400
               + L  AR+ +   + VL+ GETG+GKEV+ARALH A +R   PFVAVNCAAIP+ L
Sbjct: 346 TRYARALRMARQGLANELPVLLLGETGTGKEVIARALHMAGARCDKPFVAVNCAAIPEGL 405

Query: 401 IESELFGYTPGSFTGGRAKGMKGLIAQADRGTLFLDEIGDMPMALQTRLLRVLSEGEVLP 460
           IESELFGY  G+FTG R  GM G + QA  GTLFLDEIGDMP+ALQ RLLRVL + +V P
Sbjct: 406 IESELFGYREGAFTGSRRGGMVGRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAP 465

Query: 461 LGAESPQRVDIAVVAATHRHLPGLVASGRFREDLYYRLCGAVLKLPPLRARGDMRYLIEG 520
           LGA   Q +D+A++ ATHR L  LV    FREDL+YR+ G  + LP LR R D   L+  
Sbjct: 466 LGAGEEQDIDVALICATHRDLKRLVEEKHFREDLFYRVNGISVMLPALREREDFGALVTR 525

Query: 521 MFNEEAAAMPSPARLSEEAMQRLL-AHDWPGNLRELRNALRLALALC-TGASVSAQDLQL 578
           M       + +PA +  + + RLL  + WPGN+R+L   LR ALA+   G +V   D   
Sbjct: 526 ML----TTLGAPAVVLHDDLDRLLNGYQWPGNIRQLEMVLRTALAMREPGDTVLTLDHLP 581

Query: 579 QARADTVCDTEPDEDVAA---EARRLLDALKRHRWRVAHAADELGMSRATAYRHMKRL 633
            +  D +  +E  +  +    E   +  +L  H+  V+ AAD LG+SRAT YR +K+L
Sbjct: 582 DSMLDELTTSERPQAGSIRENELELIRQSLDTHQGNVSAAADALGISRATLYRKLKQL 639