Pairwise Alignments

Query, 641 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Variovorax sp. SCN45

Subject, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

 Score =  225 bits (573), Expect = 4e-63
 Identities = 155/418 (37%), Positives = 222/418 (53%), Gaps = 24/418 (5%)

Query: 228 VDVAGEVMLAFDDGGTLAGANGGAR---QAFAGHALSGAVSEL-LHMPMDAIWRIGNGGA 283
           VD AG V+LA      L G     R   + F   AL  A+ +   H+PM  + ++     
Sbjct: 95  VDSAGLVLLANPALIELCGRESAGRSVGELFGDPALLQALLDNNFHLPMREM-QLNGHSL 153

Query: 284 ISPLMPFAHTVLLPGGGEYHASLIAPRSRRAQAPATAAPSARPSDRLPPLERIAGDDPAM 343
           +   MP  +      GG      + P SR  +       SA   D     + + G+ PA+
Sbjct: 154 LLDAMPITNA-----GG---LLTLYPPSRMGERL-----SALHHDHAEGFDALLGESPAI 200

Query: 344 QKLLAQARRLVDRGIHVLVEGETGSGKEVLARALHSASSRAAMPFVAVNCAAIPDSLIES 403
           + L A+A R+      +LV GETG+GKE++ARA H+ SSR A PF+A+NCAA+P+SL ES
Sbjct: 201 RTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAPFLALNCAALPESLAES 260

Query: 404 ELFGYTPGSFTGGRAKGMKGLIAQADRGTLFLDEIGDMPMALQTRLLRVLSEGEVLPLGA 463
           ELFGY PG+FTG +  G  GL+  A++GT+FLDEIG+M   LQ +LLR LS+G    +G 
Sbjct: 261 ELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQAKLLRFLSDGSFRRVGG 320

Query: 464 ESPQRVDIAVVAATHRHLPGLVASGRFREDLYYRLCGAVLKLPPLRARGDMRYLIEGMFN 523
           +   +VD+ +++ATHR L  +VA G FREDL+YRL    L++PPLR RG    ++   F 
Sbjct: 321 DREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPPLRDRGQDILMLAHFFM 380

Query: 524 EEAAA-MPSPA-RLSEEAMQRLLAHDWPGNLRELRNALRLALALCTGASVSAQDLQLQ-- 579
           ++A   +  PA RL+      LLA+ WPGN+R+L+N +  A A+C G  V   DL +   
Sbjct: 381 QQACTQIQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRAAAICEGNLVDIGDLDIAGT 440

Query: 580 --ARADTVCDTEPDEDVAAEARRLLDALKRHRWRVAHAADELGMSRATAYRHMKRLGI 635
             AR         ++ V    R LL  L          A  L  S     + +++ GI
Sbjct: 441 SVARGQDGEVASLEQAVGDFERELLQRLYASYPSTRQLAGRLQTSHTAIAQRLRKYGI 498