Pairwise Alignments

Query, 402 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 411 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  349 bits (896), Expect = e-101
 Identities = 174/393 (44%), Positives = 256/393 (65%), Gaps = 7/393 (1%)

Query: 7   ALALALGAAFSAGASAQVSDDVIRIGFISDMSGLYRDYDGPAGAEAIRMAIADMGGAIDG 66
           ALA  + AAF+ GASA+     +++G ++D +G+  D+ G     A +MAIAD GG + G
Sbjct: 19  ALAALVCAAFAGGASAES----VKVGVLNDQAGVQADFAGAGSVVAAKMAIADFGGKVAG 74

Query: 67  KKIELVTADHQNKPDIAAAKAREWFDVQKVDMLIGGVNSGAAIAMAGVAADKKKPYFVVG 126
             IELV ADHQNK DI     R+WFD   VD ++   NS  A+ ++G+A  K K   + G
Sbjct: 75  MPIELVAADHQNKADIGVNVTRQWFDTDGVDAVLDVPNSAVALGVSGIARQKNKVAIISG 134

Query: 127 SGASSLTNEYCSPYTVHYAYDTVAMARGTASAVVKAGGKSWYFVAADYAFGAALQNDATK 186
            G S LT + CSP TVH+ YDT A A    +AV KAGG +WYF++ DYAFG AL+ DA +
Sbjct: 135 GGTSDLTGKDCSPNTVHWTYDTWAQANTVGTAVTKAGGNTWYFISVDYAFGHALERDAGE 194

Query: 187 TVLASGGTVAGSVKHPLGASDFSSFMLQAQNSKAQVLALANAGGDTVNAIKSAAEFGLGK 246
            + A+GG + G+V+HPLG SD SSF+LQ Q S A+V+ L +AG DT+NA+K A+EFG+ K
Sbjct: 195 AIKAAGGKILGTVRHPLGTSDLSSFLLQGQASGAKVIGLGSAGADTINAVKQASEFGIVK 254

Query: 247 -NMKLAGMIITINDVHALGLKTSQGMYLTDSWYWNQSPESREWSRRFFDKH-KRMPSSFH 304
              KL  M++ +ND+ ALGL+T+QG++L++++YW+ + ++R +++RF + +  R P+  H
Sbjct: 255 AGQKLVAMLMVLNDISALGLETAQGLFLSEAFYWDLNDQTRSFAKRFAEANGGRYPNMVH 314

Query: 305 AGDYSAALQYLQAVKAAGS-DDADKVMAQLRKTKFNDMFVKGGWLRDDGLMVHDMHLMQV 363
           AG Y+  L YL+AV+  GS  D  KV+  ++    +D     G +R DG  +HDMHL +V
Sbjct: 315 AGVYAGLLHYLKAVEKVGSAKDGAKVVEAMKAIPTDDPLFGKGAVRPDGRAIHDMHLFEV 374

Query: 364 KTPAESKEPWDYYKVVEPIRGEAAWTTKAESRC 396
           K+PAESK P+D+YK++  +  + A+   A   C
Sbjct: 375 KSPAESKGPYDFYKLIATVPADKAFRPLAAGNC 407