Pairwise Alignments

Query, 402 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 391 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 78.2 bits (191), Expect = 4e-19
 Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)

Query: 5   RTALALALGAAFSAGASAQVSDDVIRIGFISDMSGLY----RDYDGPAGAEAIRMAIADM 60
           R  L L  GA  +A A        +RIG I   SG Y    R +D       + + +A  
Sbjct: 3   RRTLGLLAGALVAAPALVFARVRPLRIGVIGSWSGPYAGGGRQFDA-----GMAVWLAAH 57

Query: 61  GGAIDGKKIELVTADHQNK-PDIAAAKAREWFDVQKVDMLIGGVNSGAAIAMAGVAADKK 119
              I G+ +EL+  D     PD A   A++  + +KVD+L G   S  A A+  VAA  +
Sbjct: 58  NHHIAGRPVELLRRDVPGSAPDQARRHAQDLVESEKVDLLSGLDFSSNAYAVGAVAAQAR 117

Query: 120 KPYFVVGSGASSLTNEYCSPYTVHYAYDTVAMARGTASAVVKAGGKSWYFVAADYAFGAA 179
            P  V+ + +S +T     P+ V  ++    +    A   ++ G +    V ADYA G  
Sbjct: 118 MPLIVMNAASSGITAR--CPFAVRVSFTIAQVTLPLARWALQQGLRDVCTVVADYASGVD 175

Query: 180 LQNDATKTVLASGGTVAGSVKHPLGASDFSSFMLQAQNSKAQVL 223
            ++     + A GG V   ++ PL   D+S++ML+ +  K Q +
Sbjct: 176 AESAFVSGITAGGGRVGAMLRVPLATLDYSAYMLRLRELKPQAV 219