Pairwise Alignments

Query, 402 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 97/377 (25%), Positives = 157/377 (41%), Gaps = 11/377 (2%)

Query: 10  LALGAAFSA--GASAQVSDDVIRIGFISDMSGLYRDYDGPAGAEAIRMAIADMGGAIDGK 67
           LALGA  S   GA    +D  +    +  MSG +  Y G       R+AIA+    + G 
Sbjct: 11  LALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASY-GKYADMGSRLAIAEHPQLL-GH 68

Query: 68  KIELVTADHQNKPDIAAAKAREWFDVQKVDMLIGGVNSGAAIAMAGVAADKKKPYFVVGS 127
            ++    D +     A  K +E           G   S +A+A++     K    F+   
Sbjct: 69  PLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSK-EIHKAGGVFMTPV 127

Query: 128 GASSLTNEYCSPYTVHYAYDTVAMARGTASAVVKA--GGKSWYFVAADYAFGAALQNDAT 185
           GA  +T + C+  T  ++  T    R T   + +     K WY +   Y FG AL ++A 
Sbjct: 128 GADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNAR 187

Query: 186 KTVLASGGTVAGSVKHPLGASDFSSFMLQAQNSKAQVLALANAGGDTVNAIKSAAEFGLG 245
           K     G    G+  H L   +FS ++  A  +K  VL L N G    NA++ A  FG+ 
Sbjct: 188 KVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGIK 247

Query: 246 KNMK-LAGMIITINDVHALGLKTSQGMYLTDSWYWNQ--SPESREWSRRFFDKHKRMPSS 302
             MK L      ++    LG    +G+YL  + YW+Q  +P ++         +   P+ 
Sbjct: 248 DRMKVLMVWSAGLDQFQELGSDVLEGVYL-GAQYWHQVDTPLNKLLVAATRKAYGINPNY 306

Query: 303 FHAGDYSAALQYLQAVKAAGSDDADKVMAQLRKTKFNDMFVKGGWLRDDGLMVHDMHLMQ 362
             A DY      L+A+  AGS D   V A L+  +F     +      D  ++ D +L++
Sbjct: 307 PLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQVLKDYYLLR 366

Query: 363 VKTPAESKEPWDYYKVV 379
            K   + ++  D  +V+
Sbjct: 367 GKPQGQMRDEDDLAEVI 383