Pairwise Alignments

Query, 393 a.a., Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 388 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  124 bits (311), Expect = 5e-33
 Identities = 91/372 (24%), Positives = 164/372 (44%), Gaps = 6/372 (1%)

Query: 19  ALLATPLAALAAAATGEPVWFGVSGPLTGQNAQYGAQWKAGFDLALEHINAQGGIQGRPL 78
           AL A P  A     + + +  G    L+G  A +G Q + G  L ++ IN QGGI GR +
Sbjct: 12  ALAAGPALAQTQGVSKDEIVIGSIQDLSGPIAGFGKQVRMGMLLRVDEINEQGGINGRKI 71

Query: 79  AYNFEDSQSDPRQSVAIAQKLVNDKRVLIELGDFSSPASMAASPI-YQRAGLVQLGFTNS 137
               EDS+ DPR +V  AQKLVN  ++   +G   +  +MAA P+ +Q+  L     T +
Sbjct: 72  KLLVEDSKYDPRNAVLAAQKLVNQDKIFAMVGHIGTAQNMAAMPVQFQKNVLNFYPITAA 131

Query: 138 HPDFTKGGDYIWSPSISQADAQPLLAELAVKTLGFKRIAVLYLNTDWGRTSKDVLVKAAQ 197
              +       +S + +  D   ++  +  K  G K++  +Y + ++G   K       +
Sbjct: 132 RQMYDPFHKLKYSFAATYYDQMRIVVPMLAKEKGAKKVCAMYQDDEFGLEVKRGAEDGLK 191

Query: 198 ERGAQVAIAEGYQPDEKDFRSTLVRVRDANPDGLVLISYYPDGALIAGQVRSVGLRQPIA 257
             G  +A    Y+    DF S + +++    D +V+ +   +        + +G      
Sbjct: 192 TAGMTLAAETTYKRGATDFASQMQKLQADQCDLVVMGTIIRETIGGIATAKRLGFNPTFV 251

Query: 258 AVGSVYSPKFIELGGASVNGIFTNTAF---YPDEPRAEVQDFVKSFRAKYNKEPDAFNAY 314
              + Y+    +LGG ++NG +        Y D     ++ +   ++ K+N+EP  F+ Y
Sbjct: 252 GSSAAYTDLIHKLGGPAMNGFYAAMTVQHPYLDSASQPLRFWANKYQTKFNEEPTVFSVY 311

Query: 315 AYDAVVYAAAALRQAGANADRKAVRDAFYKIKDVPSVIFGKASFDAQTRRIIGVKSVNL- 373
            Y ++     A  +AG     ++   A   +K +P  IFG A       + +G  +  L 
Sbjct: 312 GYGSIDAFIRAATKAGPGLTTESFIKAMDTMK-IPPDIFGSAEMSFSPTKRLGSSATRLS 370

Query: 374 VVKDGKWAQLDE 385
            ++DG+W  L E
Sbjct: 371 QIQDGRWKVLSE 382