Pairwise Alignments

Query, 393 a.a., Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 373 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Enterobacter asburiae PDN3

 Score =  132 bits (331), Expect = 2e-35
 Identities = 97/357 (27%), Positives = 171/357 (47%), Gaps = 18/357 (5%)

Query: 16  LSAALLATPLAALAAA------ATGEPVWFGVSGPLTGQNAQYGAQWKAGFDLALEHINA 69
           +S   + TPL+ + A       +    +  GV+GP TG NA YG Q+  G   A E INA
Sbjct: 1   MSLKFIRTPLSLVLAGCLVTAFSARADIVIGVAGPFTGPNATYGDQYWHGATQAAEDINA 60

Query: 70  QGGIQGRPLAYNFEDSQSDPRQSVAIAQKLVNDKRVLIELGDFSSPASMAASPIYQRAGL 129
            GGI G  +     D   +P+Q+VA+A +LV+  +V   +G F S ++M AS +Y  AG+
Sbjct: 61  AGGINGEKIKLVQGDDACEPKQAVAVANRLVDQDKVNAVVGHFCSSSTMPASEVYSDAGI 120

Query: 130 VQLGFTNSHPDFTKGGDYIWSPSISQADAQPLLA-ELAVKTLGFKRIAVLYLNTDWGRTS 188
           + +   +++P  T+ G         + D Q  +A +  +  L  KR+ +++    +G+  
Sbjct: 121 IAITPGSTNPLITERGMSDMFRMCGRDDQQGQVASDFIIDKLKAKRVVIIHDKDTYGQGL 180

Query: 189 KDVLVKAAQERGAQVAIAEGYQPDEKDFRSTLVRVRDANPDGLVLISYYPDGALIAGQVR 248
            D    A  +RG Q  + EG    EKDF + + ++    PD +     +P+   +  Q+R
Sbjct: 181 ADATKAALAKRGVQDVMYEGLSRGEKDFNALVTKIGAQKPDVVFFGGCHPEAGPLVRQMR 240

Query: 249 SVGLRQPIAAVGSVYSPKFIELGGAS--VNGIFTNTAFYPDEPR--AEVQDFVKSFRAKY 304
             G++    +   + + + +   G     NGI+     +  +PR   + +  ++ FRA  
Sbjct: 241 EQGVQAKFFSGDCIVNEEMVTAAGGPQYTNGIYMT---FGKDPRLIPDGKAVIEKFRAG- 296

Query: 305 NKEPDAFNAYAYDAVVYAAAALRQAGANADRKAVRDAFYKIKDVPSVIFGKASFDAQ 361
             EP+ +  Y+Y +V   AAA +  G     KA    + K   V +V+ GK ++D++
Sbjct: 297 KFEPEGYTLYSYASVQAIAAAFKATGGKDSAKA--SEWLKANSVDTVM-GKKAWDSK 350