Pairwise Alignments

Query, 393 a.a., Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 394 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  103 bits (257), Expect = 9e-27
 Identities = 89/331 (26%), Positives = 155/331 (46%), Gaps = 11/331 (3%)

Query: 17  SAALLATPLAALAAAATGEPVWFGVSGPLTGQNAQYGAQWKAGFDLALEHINAQGGIQGR 76
           +AAL+      +A+AA  +P+  GV  PL+G  A  G Q + G +LA + +NA GGI GR
Sbjct: 9   TAALVLLGFGGIASAA--DPIRIGVVTPLSGTYAPIGQQVRWGLELATKEVNAAGGILGR 66

Query: 77  PLAYNFEDSQSDPRQSVAIAQKLVNDKRVLIELGDFSSPASMAASPIYQRAGLVQLGFTN 136
            +   FED +++P  +   A+KL    +V    G  +S +++A   + +R G + +  T 
Sbjct: 67  QVELLFEDEEANPAVATQKAEKLFQVNKVDFLTGTVNSGSTLAVGQLAERNGRL-IATTV 125

Query: 137 SHPD---FTKGGDYIWSPSISQADAQPLLAELAVKTLGFKRIAVLYLNTDWGRTSKDVLV 193
           S  D     K    ++  +         LAE   K     ++  L  + + GR++     
Sbjct: 126 SFSDAITTDKCSLNVFRVNARAGQQSAALAEWLAKDKPKAKVYYLGPDYEMGRSTVAAFK 185

Query: 194 KAAQERGAQVAIAEGYQP-DEKDFRSTLVRVRDANPDGLVLISYYPDGALIAGQVRSVGL 252
           +AA++ GAQ +  E + P   KD+     ++R A P  L   +   D   +  Q+   GL
Sbjct: 186 QAAEKTGAQ-STGEVFAPLGSKDYSQYFGQLRAARPSVLYTSTAGNDTVRLLTQMNEYGL 244

Query: 253 RQPIAAVGSVYSPKFIELG--GASVNGIFTNTAFYPDEPRAEVQDFVKSFRAKYNKEPDA 310
            + +  VG+  +     +G  G + +G  T   +  +    E + FV +FR  Y+  PD 
Sbjct: 245 LRNLTIVGASGTVTAQNIGAIGKAADGFVTGVGYSAELTTPENKAFVAAFRKAYDTAPDL 304

Query: 311 FNAYAYDAVVYAAAALRQAGANADRKAVRDA 341
           + A +Y  + +  AA+ +AG + D   +R A
Sbjct: 305 YGADSYGLIGFFKAAVEKAG-STDTDTLRKA 334