Pairwise Alignments

Query, 800 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Variovorax sp. SCN45

Subject, 842 a.a., penicillin-binding protein 1A from Rhodanobacter sp000427505 FW510-R12

 Score =  474 bits (1219), Expect = e-137
 Identities = 259/613 (42%), Positives = 376/613 (61%), Gaps = 12/613 (1%)

Query: 24  WKRIAGWGAVVVGSGALVVLVAAIVAVVAIYPKLPDVSALSDYRPKLPLRVYSAEGQMIG 83
           +KR+  W   +  SG L+ +VA  VA   I P+LP V+ L +Y  ++PLRV SA+G++I 
Sbjct: 4   FKRLLRWALALAFSGLLLAVVAVGVAYWLIAPRLPSVAELKNYPMQVPLRVLSADGKLIA 63

Query: 84  EFGEERRNLTPFANIPKVMKDAVLAVEDARFYDHGGVDYKGFLRAA--VASLKGGRKQGA 141
            FGE RR       +P  +K AVL+ EDA FY H GVD+ G  RA   V    G +  G 
Sbjct: 64  SFGETRRIPVDIGKVPDRLKHAVLSAEDADFYHHPGVDWHGIARAGWHVLVTGGDKGPGG 123

Query: 142 STITMQVARNVYLSSERTMSRKTYEILLALRLEQQLTKDQILEIYLNQIYLGNRAYGFAA 201
           STIT QVARN +LS E+  SRK  EI +ALR+E +L+KDQILE+YLN+++LG+R+YG AA
Sbjct: 124 STITQQVARNFFLSPEKLYSRKLTEIFIALRIEHELSKDQILELYLNKMFLGHRSYGVAA 183

Query: 202 AAETYFGKPLQDVTIAEAAMLAGLPKAPGANNPVANPRRARARQLYVIDRMQETGFITAE 261
           AAE Y+GK L  +T+AE A++A   + P A NP+ +P+RA AR+ +V+  M    +IT  
Sbjct: 184 AAEYYYGKTLDQLTVAECALIASTFQLPSAVNPINSPKRAIARRNWVLGEMLRHDYITKA 243

Query: 262 QAAAAKKEELHLRDAADPNRLHAEYVAETVRQMMYAQYGDSIYTSGLKVYTSLVAADQAA 321
               A  E         P  + A Y+AE VR+ +  ++G+   T G  V T+L +  Q A
Sbjct: 244 VYEQAIAEPNRAYPHEQPIEVDAPYLAEMVRRQVLDRFGNDALTEGYVVRTTLQSGRQQA 303

Query: 322 AYKSLRKGIMDYERRQAYRGPEKFVDLPTEQKEVDEAVDDALAEHPDNGDVIAAVVLDAN 381
           A ++LR G++ Y+RR  +RGPE   +LP    E +  +D  L+ +     +   +V  ++
Sbjct: 304 AVEALRDGLIAYDRRHGWRGPEAHQELPAGAGEAE--LDSLLSAYTSVSGMQPGIVTASD 361

Query: 382 PKEISAVRANGETIQI---TGDGLKP-AQSGLAAKAPPNIK--IRRGAVIRVAKTPKNTW 435
            K+ +   +N E++ +   T    +P         AP  +   ++RG +IR+A+  K  W
Sbjct: 362 AKQATVYLSNRESVILDLATVSWARPHINDDRVGAAPSRVDGVLKRGDIIRLARDDKGEW 421

Query: 436 EITQLPEVEAAFIGMDPRSGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALE 495
           ++ Q+P  +AA   + P  G+I+ALVGGF+F ++KFN    A RQPGSSFKP++YSAA E
Sbjct: 422 QLAQIPAAQAALASVAPEDGSIQALVGGFNFVRSKFNRAVMAARQPGSSFKPYLYSAAFE 481

Query: 496 KGFTPATVVNDAPLYF-DPSANGGQPWEPKNFEGTYEGPMPLRTALMKSKNLVTLRVLQS 554
           +GFTPA+++NDAPL   DPS   G  W P N +  + GPM LR AL++SKNLV++R+L +
Sbjct: 482 RGFTPASIINDAPLALPDPSRPNG-IWTPSNDDDKFAGPMRLREALVQSKNLVSVRLLDA 540

Query: 555 IGAPYAQDWVTKFGFDKDKQPANLPMGLGAGSVTPMQMAVGYSVFANGGYRVNPYLVTKV 614
           +G  Y +++ T+FGF +D  PANL M LG  SV+PM MA GY+VFANGGY V PY + ++
Sbjct: 541 VGVRYMREYATRFGFSQDAMPANLSMALGTASVSPMGMARGYAVFANGGYLVTPYFIHEI 600

Query: 615 TDMKGKVLMETEP 627
            D  G+ +    P
Sbjct: 601 DDRNGQPVYVANP 613



 Score =  102 bits (253), Expect = 1e-25
 Identities = 54/117 (46%), Positives = 71/117 (60%), Gaps = 4/117 (3%)

Query: 627 PPVLDESRRAIPQRNAFIMSSLLQSVVRNGTGFKAYQALKRDDLYGKTGTTNDSFDTWFA 686
           PPVL      I  RN ++++SL++ V+  GTG  A +AL+RDDL GKTG+TND  D WF 
Sbjct: 678 PPVLAPG--VIEARNDYLVTSLMKDVILRGTG-SAARALERDDLAGKTGSTNDHRDAWFV 734

Query: 687 GFQPTMVGVAWVGYDTPRQLGVRGETGGSLSLPIWTGYMQTALQGVPMTQPAEPPGV 743
           GF   +    WVG+D    LG RGE G   +LPIW  YM + L+G P +    PPG+
Sbjct: 735 GFDGELSTAVWVGFDDYSSLG-RGEFGAKAALPIWMSYMGSVLKGQPSSTLPMPPGI 790