Pairwise Alignments

Query, 800 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Variovorax sp. SCN45

Subject, 774 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

 Score =  150 bits (379), Expect = 3e-40
 Identities = 103/299 (34%), Positives = 155/299 (51%), Gaps = 32/299 (10%)

Query: 69  KLPLRVYSAEGQMIGEF---GEERRNLTPFANIPKVMKDAVLAVEDARFYDHGGVDYKGF 125
           KLP  V   E  MIG       E R L     +P  + + ++AVED  FY H GV  K  
Sbjct: 146 KLP--VVRLEPLMIGGIYPKNLEDRILIKLDQVPPYLLETLVAVEDRDFYHHWGVSPKSI 203

Query: 126 LRAAVASLKGGRK-QGASTITMQVARNVYLSSERTMSRKTYEILLALRLEQQLTKDQILE 184
            RA   +  GG+  QG ST+T Q+ +N YL++ER+++RK  E ++A+ LE   +K +ILE
Sbjct: 204 ARAVWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAMLLELHYSKQEILE 263

Query: 185 IYLNQIYLGN----RAYGFAAAAETYFGKPLQDVTIAEAAMLAGLPKAPGANNPVANPRR 240
            YLN++++G       +GF  A++ +FG+PL ++ + + A+L G+ K P   NP  NP R
Sbjct: 264 AYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLHQVALLVGMVKGPSYYNPRRNPER 323

Query: 241 ARARQLYVIDRMQETGFITAEQAAAAKKEEL------HLRDAADPNRLHAEYVAETVRQM 294
           A  R+  V+D +++ G  TAEQ AAAKK  L       L D++ P  +      + V++ 
Sbjct: 324 ALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRGKLADSSFPGFI------DLVKRQ 377

Query: 295 MYAQYGDSIYT-SGLKVYTSLVAADQAAAYKSL---------RKGIMDYERRQAYRGPE 343
           +   Y D   T  GL+++TS     Q  A  S+         RKG  + E       PE
Sbjct: 378 LREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLTGRKGSDEVEAAMVVTNPE 436



 Score =  149 bits (376), Expect = 6e-40
 Identities = 103/311 (33%), Positives = 159/311 (51%), Gaps = 23/311 (7%)

Query: 442 EVEAAFIGMDPRSGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKG--FT 499
           EVEAA +  +P +G ++A++G        FN    A R  GS  KP +Y  ALEK   +T
Sbjct: 425 EVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYT 484

Query: 500 PATVVNDAPLYFDPSANGGQPWEPKNFEGTYEGPMPLRTALMKSKNLVTLRVLQSIGAPY 559
             + ++D PL        GQ W P+NF+    G + L   +  S N+ T R+   +G P 
Sbjct: 485 LTSWLSDDPL--SVKGGDGQVWTPQNFDRRSHGTVFLYQGIAHSYNISTSRLGLEVGVPN 542

Query: 560 AQDWVTKFGFDKDKQPANLPMGLGAGSVTPMQMAVGYSVFANGGYRVNPYLVTKVTDMKG 619
               + + G  ++  PA   + LGAG++TPM++A  Y   ANGG+       T +  ++ 
Sbjct: 543 VLKTIARLGVTREF-PAFPSILLGAGAMTPMEVATMYQTLANGGFN------TPMRGIRS 595

Query: 620 KVLMETEPPVLDESRRAIPQR----NAFIMSSLLQSVVRNGTGFKAYQALKRD-DLYGKT 674
            +  E EP  L      I QR    + +++ + +Q V+R GTG   Y  L  +  L GKT
Sbjct: 596 VLTAEGEP--LKRYPFQIQQRFDAGSIYLIQNAMQRVMREGTGRSVYSVLPANLTLAGKT 653

Query: 675 GTTNDSFDTWFAGFQPTMVGVAWVGYDTPRQLGVRGETGGSLSLPIWTGYMQTALQGVPM 734
           GT+NDS D+WFAGF   ++ V W+G D   +    G TG   +L +WT +M+ A   +P+
Sbjct: 654 GTSNDSRDSWFAGFGQDVLAVVWLGRDDNGKTPFTGATG---ALQVWTSFMRKA-DPLPL 709

Query: 735 TQPAEPPGVVR 745
             P +P  +V+
Sbjct: 710 NMP-QPDNIVQ 719