Pairwise Alignments

Query, 533 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

 Score =  260 bits (665), Expect = 8e-74
 Identities = 178/538 (33%), Positives = 279/538 (51%), Gaps = 41/538 (7%)

Query: 5   VLRLAGITKRFGSLVANDAISLDLQAGEVLALLGENGAGKSTLMSILFGHYVADEGAIEV 64
           VL L+ + K + + V +D +SL L AGEVLAL GENGAGKSTL  I+ G      G + +
Sbjct: 9   VLSLSTMGKDYAAPVLDD-VSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLL 67

Query: 65  FGAPLPPGNPKAALAAGVGMVHQHFTLADNLSVLDNVMMGTEPLWRPVSRRAAARARLLD 124
            G P  PG+ + A   GV MV Q   L   LSV +N+++   P      RR         
Sbjct: 68  DGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAAR 127

Query: 125 VAQRFGLP-VQPDAKIGSLSVGERQRVEILKALYRGARILILDEPTAVLTPQESEALFAT 183
              + G+  + P   +  L +G++Q VEI + L    R+L+LDEPTA+LTP+E+  LF  
Sbjct: 128 QLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQ 187

Query: 184 LAQMVAQGLSVIFISHKLGEVLRVSHRVAVLRGGKLVAEARTADTTQAQLALWMVGHAVE 243
           +  + A+G++++++SH+L E+ R++ RVAVLR G+LV     A   +++L   MVG AV 
Sbjct: 188 IELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVH 247

Query: 244 APKRRPAKSVGDAVCVLDHVSTAAGKDGGQDRLREVSLTLRAGEITAIAGVSGNGQVALA 303
             + R  ++ G        V  +A   G    +R+V + LRAGE+  +AG+ G+G+  L 
Sbjct: 248 EHEGRERRTAGP-------VLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELV 300

Query: 304 ELLCGTRRASSGSAQLMGRALP--------PSPARLVQRGVARIPEDRHAVGVVGDLPVW 355
            LL G  RA  G   L     P         SP + ++ G+  + EDR + G++    + 
Sbjct: 301 RLLFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIR 360

Query: 356 ENAVSERLRSPVFSRWSFIVKRAAARLHARRIEKAFDVRGAGLMAPARSLSGGNMQKLIL 415
            NA    L +   + W   ++RA  R  A+++ +   +R   +  P  +LSGGN QK++ 
Sbjct: 361 VNATLSDLGAISRAGW---LQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVF 417

Query: 416 GRALLSPEQPEAAKGDDNKKYPNRAPRLIVAHQPTWGLDIGAVAYVQQQLIAARDAGAAV 475
            R L                  +R  ++++  +PT G+D+GA A +  +L    DAG A+
Sbjct: 418 ARWL------------------HRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKAL 459

Query: 476 LVISDDLDEVLALGDRVAVMHGGHLGEARPATAWTREAIGLAMAGATAAAPQRNGAPT 533
           L++S DL E++A+ DR+ VM  G L        WT +++   +A A + A  R  APT
Sbjct: 460 LMVSSDLRELMAMCDRIGVMSAGRLVAVFERGEWTEQSL---LAAAFSDATGRAAAPT 514