Pairwise Alignments
Query, 533 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45
Subject, 500 a.a., predicted sugar transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113
Score = 246 bits (629), Expect = 1e-69
Identities = 165/493 (33%), Positives = 250/493 (50%), Gaps = 28/493 (5%)
Query: 5 VLRLAGITKRFGSLVANDAISLDLQAGEVLALLGENGAGKSTLMSILFGHYVADEGAIEV 64
+LR G++K F + A D + L+ GE++ALLGENGAGKSTL+ L G Y AD G I +
Sbjct: 9 ILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWL 68
Query: 65 FGAPLPPGNPKAALAAGVGMVHQHFTLADNLSVLDNVMMGTEPLWRPVSRRAAARARLLD 124
G + P N A G+G V+Q L N+SV DN+ +G EP + RR R +
Sbjct: 69 EGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATE 128
Query: 125 VAQRFGLPVQPDAKIGSLSVGERQRVEILKALYRGARILILDEPTAVLTPQESEALFATL 184
+ +G + + SV +Q V I +A+ A++LILDEPTA L QE E LF +
Sbjct: 129 LMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELLFDLM 188
Query: 185 AQMVAQGLSVIFISHKLGEVLRVSHRVAVLRGGKLVAEARTADTTQAQLALWMVGHAVEA 244
Q+ +G+S+IF++H L +V +VS R+ VLR G V T + Q +L M+G ++
Sbjct: 189 RQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDT 248
Query: 245 PKRRPAKSVGDAVCVLDHVSTAAGKD-GGQDRLREVSLTLRAGEITAIAGVSGNGQVALA 303
+ A +L AA K+ G + + L +R GEI +AG+ G+G+ A
Sbjct: 249 HALQRAGRT-----LLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETA 303
Query: 304 ELLCGTRRASSGSAQLMGRALP-PSPARLVQRGVARIPEDRHAVGVVGDLPVWENAVSER 362
E++ G + A SG+A + G+ SP + G+ PEDR G++ V EN +
Sbjct: 304 EVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENII--- 360
Query: 363 LRSPVFSRWSFIVKRAAARLHARRIEKAFDVRGAGLMAPARSLSGGNMQKLILGRALLSP 422
L W + R + A R + +R P LSGGN QK++L R LL+
Sbjct: 361 LALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLT- 419
Query: 423 EQPEAAKGDDNKKYPNRAPRLIVAHQPTWGLDIGAVAYVQQQLIAARDAGAAVLVISDDL 482
P+ ++ +PT G+D+GA A + + + G A+LVIS +L
Sbjct: 420 -----------------RPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSEL 462
Query: 483 DEVLALGDRVAVM 495
+E++ DRV +M
Sbjct: 463 EELVGYADRVIIM 475
Score = 75.1 bits (183), Expect = 6e-18
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 16/226 (7%)
Query: 13 KRFGSLVANDAISLDLQAGEVLALLGENGAGKSTLMSILFGHYVADEGAIEVFGAPLPPG 72
K +G L+++ GE++ L G G+G++ ++FG AD G + G P
Sbjct: 268 KNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLR 327
Query: 73 NPKAALAAGVGMVHQHFT---LADNLSVLDNVMMGTEPL--W-RPVSRRAAARARLLDVA 126
+P A G+G + + SV +N+++ + W RP+SR+ ++A
Sbjct: 328 SPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQ-----EIA 382
Query: 127 QRF----GLPV-QPDAKIGSLSVGERQRVEILKALYRGARILILDEPTAVLTPQESEALF 181
+RF G+ + I LS G +Q+V + + L + LILDEPT + +
Sbjct: 383 ERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEII 442
Query: 182 ATLAQMVAQGLSVIFISHKLGEVLRVSHRVAVLRGGKLVAEARTAD 227
+ + A GL+++ IS +L E++ + RV ++R K VAE A+
Sbjct: 443 RLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAE 488
Score = 53.9 bits (128), Expect = 1e-11
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 272 GQDRLREVSLTLRAGEITAIAGVSGNGQVALAELLCGTRRASSGSAQLMGRALPP-SPAR 330
G L V +LR GEI A+ G +G G+ L + L G A G+ L G+A+ P + A
Sbjct: 21 GVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAH 80
Query: 331 LVQRGVARIPEDRHAVGVVGDLPVWENA-VSERLRSPVFSRWSFIVKRAAARLHARRIEK 389
Q G+ + ++ V ++ ++ V +N + + R + KRA + +
Sbjct: 81 AQQLGIGTVYQE---VNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGF-- 135
Query: 390 AFDVRGAGLMAPARSLSGGNMQKLILGRALLSPEQPEAAKGDDNKKYPNRAPRLIVAHQP 449
+ DVR P S Q + + RA+ + + ++++ +P
Sbjct: 136 SLDVR-----EPLNRFSVAMQQIVAICRAI------------------DLSAKVLILDEP 172
Query: 450 TWGLDIGAVAYVQQQLIAARDAGAAVLVISDDLDEVLALGDRVAVMHGG 498
T LD V + + RD G +++ ++ LD+V + DR+ V+ G
Sbjct: 173 TASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNG 221