Pairwise Alignments

Query, 775 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45

Subject, 756 a.a., ATP-dependent serine protease from Pseudomonas putida KT2440

 Score =  212 bits (539), Expect = 7e-59
 Identities = 190/592 (32%), Positives = 275/592 (46%), Gaps = 43/592 (7%)

Query: 203 LDAVADRLPETGARRGLHVFPEVAWEQGALSDEIAARLARG--GNLLLVGEPGVGKSVVI 260
           LDA A  L E  AR G  + P V  EQ    + +A  LAR    N LLVGE GVGK+  I
Sbjct: 173 LDAYASNLNEL-ARAG-RIDPLVGREQEV--ERVAQILARRRKNNPLLVGEAGVGKTA-I 227

Query: 261 LEAIRKAHRLTAARD--APPTFWRSHAERLVGRAKYLGEWQALCDQTV-EWLDMSNGLLW 317
            E + K        D  A    +      L+   KY G+++      + E       +L+
Sbjct: 228 AEGLAKRIVDGQVPDLLAQSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPQAILF 287

Query: 318 VTDFVNLLQVGGESPEESMAAYLL-PALRRGTLRLVGEANPSELEIARQRLPGFIDCFET 376
           + +   ++  G  S     A+ LL P L  G +R +G     E     ++       F+ 
Sbjct: 288 IDEIHTIIGAGAASGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQK 347

Query: 377 LRLPEMDSVRARRVLDLFAGHAKNTLSIEIERPALDTGYRLLGRYVRYDSFPGKAVRFFG 436
           + + E        +L    G  ++  +IE    AL     L  RY+     P KA+    
Sbjct: 348 VDVSEPSVEDTVGILRGLKGRFESHHNIEYSDEALRAAAELASRYINDRHMPDKAI---- 403

Query: 437 DCVREAIAGQTGVVTEASAIAHF---------AKSTGLPESFLRDDQPLDDTQVHGFFAQ 487
           D + EA A Q  +  EAS +            AK   +P   +          +      
Sbjct: 404 DVIDEAGAYQR-LQPEASRVKRIDVPQVEDIVAKIARIPPKHVTSSDKELLRNLERDLKL 462

Query: 488 KLFGQDAAIGHLKDVVYLFKAGLNDPAKPIATLLFAGPTGVGKTAAAKALARYFFGAGDD 547
            +FGQD AI  L   + L +AGL  P KP+ + LFAGPTGVGKT AA+ LA+        
Sbjct: 463 TVFGQDQAIDSLATAIKLSRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKAL------ 516

Query: 548 ADPLFRIDMSEFQHAFQIARLIGSGK------RPGKLVEHVRRQPFSVVLLDEIEKADAS 601
              L R DMSE+     ++RLIG+        + G L E + +QP  V+LLDEIEKA   
Sbjct: 517 GVELVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPE 576

Query: 602 VFDLLLTVLDEGRLRDSRGRMTDFRSTVIVMTTNLGVRHG--ASLGFGEPANGGGAVHDI 659
           VF+LLL V+D G L D+ GR  DFR+ +++MTTN G      AS+GF    +   A+  I
Sbjct: 577 VFNLLLQVMDHGTLTDNNGRKADFRNVILIMTTNAGAETAARASIGFTHQDHASDAMEVI 636

Query: 660 RQFFRPEFFNRIDRVVPFAPLSRTAIEAIAVQELQAIAQREGLARRGVRLNFSPEVVAFV 719
           R+ F PEF NR+D ++ F  LS   I++I  + L  I  +  L  + V L  S E   ++
Sbjct: 637 RKSFTPEFRNRLDTIIQFGRLSTETIKSIVDKFL--IELQAQLEDKRVLLEVSDEARGWL 694

Query: 720 ADKGFSPKYGARPLQRAVEQHVVAAVA-RAMFGPVAD-GACLEVGLVDGVVV 769
           A  G+  + GARP+ R ++  +   +A   +FG +A+ G  + V L DG +V
Sbjct: 695 AVSGYDVQMGARPMARLIQDKIKRPLAEEILFGELAEHGGVVHVDLRDGELV 746