Pairwise Alignments

Query, 775 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45

Subject, 940 a.a., putative Chaperone-associated ATPase from Pseudomonas putida KT2440

 Score =  202 bits (514), Expect = 7e-56
 Identities = 126/325 (38%), Positives = 183/325 (56%), Gaps = 19/325 (5%)

Query: 440 REAIAGQTGVVTEASAIAHFAKSTGLPESFLRDDQPLDDTQVHGFFAQKLFGQDAAIGHL 499
           RE  +G T V  E  A    ++ TG+P + L  ++      +     ++L GQD A+  +
Sbjct: 584 RERGSGSTEVKAEHVAQI-VSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAV 642

Query: 500 KDVVYLFKAGLNDPAKPIATLLFAGPTGVGKTAAAKALARYFFGAGDDADPLFRIDMSEF 559
            D V L +AGL + +KP+AT LF G TGVGKT  AKALA   +G   D   L RIDMSE+
Sbjct: 643 ADAVRLSRAGLREGSKPVATFLFLGSTGVGKTELAKALAETIYG---DESALLRIDMSEY 699

Query: 560 QHAFQIARLIGSGK------RPGKLVEHVRRQPFSVVLLDEIEKADASVFDLLLTVLDEG 613
                +ARL+G+          G+L E VRR+P+SV+LLDEIEKA A V+++LL V D+G
Sbjct: 700 GERHSVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHADVYNILLQVFDDG 759

Query: 614 RLRDSRGRMTDFRSTVIVMTTNLG-------VRHGASLGFGEPANGGGAVHDIRQFFRPE 666
           RL D +GR+ DF +T+I+ T+NLG       ++   + G          +  +R  FRPE
Sbjct: 760 RLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKAPGAAGEEYEKTKVEVMEVLRGHFRPE 819

Query: 667 FFNRIDRVVPFAPLSRTAIEAIAVQELQAIAQREGLARRGVRLNFSPEVVAFVADKGFSP 726
           F NRID ++ F  L +  I  I   +L+ +A+    A +GV L F   +V  +A  G+ P
Sbjct: 820 FLNRIDEIIVFHALGKQEIRHIVGLQLERVAR--NAASQGVTLTFDETLVDHLAQVGYKP 877

Query: 727 KYGARPLQRAVEQHVVAAVARAMFG 751
           ++GAR L+R +   +  A+AR M G
Sbjct: 878 EFGARELKRLIRSELETALAREMLG 902



 Score = 50.4 bits (119), Expect = 4e-10
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 22/211 (10%)

Query: 235 EIAARLARGGNLLLVGEPGVGKSVVILEAIRKAHRLTAARDAPPT-----FWRSHAERLV 289
           E+ AR  +  N +L+GEPGVGK+ ++ E +  A R+ A  + P T         +   LV
Sbjct: 313 EVLARRKKN-NPVLIGEPGVGKTAIV-EGL--AQRMVAG-EVPETLRDKRLVELNINSLV 367

Query: 290 GRAKYLGEWQALCDQTVEWLDMSNG-LLWVTDFVNLLQVGGESPEE---SMAAYLLPALR 345
             AKY GE++    + ++ +    G L+   D V+ +   G+   E    +A    P + 
Sbjct: 368 AGAKYRGEFEERVQKVLKEIAEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMA 427

Query: 346 RGTLRLVGEANPSELEIARQRLPGFIDCFETLRLPEMDSVRARRVL----DLFAGHAKNT 401
           RG L L+G    +E +   ++       F+ + +PE    +   +L    D F  H K  
Sbjct: 428 RGELNLIGATTLNEYQKYIEQDAALERRFQPVVVPEPTVAQTIMILRGLRDTFEAHHK-- 485

Query: 402 LSIEIERPALDTGYRLLGRYVRYDSFPGKAV 432
             + I   A+     L  RYV     P KA+
Sbjct: 486 --VSITEEAIIAAAELSDRYVSARFLPDKAI 514