Pairwise Alignments

Query, 775 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Variovorax sp. SCN45

Subject, 857 a.a., ATP-dependent chaperone ClpB from Dickeya dianthicola ME23

 Score =  208 bits (530), Expect = 9e-58
 Identities = 126/333 (37%), Positives = 191/333 (57%), Gaps = 18/333 (5%)

Query: 450 VTEASAIAHFAKSTGLPESFLRDDQPLDDTQVHGFFAQKLFGQDAAIGHLKDVVYLFKAG 509
           VT+A      A+ TG+P S + + +     ++     Q++ GQ+ A+  + + +   +AG
Sbjct: 531 VTDAEIAEVLARWTGIPVSRMLESEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAG 590

Query: 510 LNDPAKPIATLLFAGPTGVGKTAAAKALARYFFGAGDDADPLFRIDMSEFQHAFQIARLI 569
           L+DP +PI + LF GPTGVGKT   K LA + F   D  D + RIDMSEF     ++RL+
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLASFLF---DSDDAMVRIDMSEFMEKHSVSRLV 647

Query: 570 GSG------KRPGKLVEHVRRQPFSVVLLDEIEKADASVFDLLLTVLDEGRLRDSRGRMT 623
           G+       +  G L E VRR+P+SV+LLDE+EKA   VF++LL VLD+GRL D +GR  
Sbjct: 648 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTV 707

Query: 624 DFRSTVIVMTTNLG----VRHGASLGFGEPANGGGAVHDIRQFFRPEFFNRIDRVVPFAP 679
           DFR+TV++MT+NLG          + + +  +   +V  +   FRPEF NRID VV F P
Sbjct: 708 DFRNTVVIMTSNLGSDLIQERFGEMNYNQMRDMVLSV--VSHHFRPEFINRIDEVVVFHP 765

Query: 680 LSRTAIEAIAVQELQAIAQREGLARRGVRLNFSPEVVAFVADKGFSPKYGARPLQRAVEQ 739
           L ++ I +IA  +LQ + +R  +  RG  +  S   +  +   GF P YGARPL+RA++Q
Sbjct: 766 LGKSHITSIAQIQLQRLYKR--MEERGYTVTVSDAALELLGRSGFDPVYGARPLKRAIQQ 823

Query: 740 HVVAAVARAMF-GPVADGACLEVGLVDGVVVAR 771
            +   +A+ +  G +  G  + +   D  +V R
Sbjct: 824 MIENPLAQQILSGALVPGKQVALDADDEAIVIR 856



 Score = 39.3 bits (90), Expect = 9e-07
 Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 11/195 (5%)

Query: 245 NLLLVGEPGVGKSVVILEAIRKAHRLTAARDAPPTFWRSHA-----ERLVGRAKYLGEWQ 299
           N +L+GEPGVGK+ ++ E +  A R+    + P               LV  AKY GE++
Sbjct: 201 NPVLIGEPGVGKTAIV-EGL--AQRIVNG-EVPEGLKNKRVLALDMGALVAGAKYRGEFE 256

Query: 300 ALCDQTVEWLDMSNG--LLWVTDFVNLLQVGGESPEESMAAYLLPALRRGTLRLVGEANP 357
                 +  L    G  +L++ +   ++  G           L PAL RG L  VG    
Sbjct: 257 ERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTL 316

Query: 358 SELEIARQRLPGFIDCFETLRLPEMDSVRARRVLDLFAGHAKNTLSIEIERPALDTGYRL 417
            E     ++       F+ + + E        +L       +    ++I  PA+     L
Sbjct: 317 DEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAML 376

Query: 418 LGRYVRYDSFPGKAV 432
             RY+     P KA+
Sbjct: 377 SHRYISDRKLPDKAI 391