Pairwise Alignments

Query, 1067 a.a., ClpB protein from Variovorax sp. SCN45

Subject, 756 a.a., ATP-dependent serine protease from Pseudomonas putida KT2440

 Score =  176 bits (446), Expect = 6e-48
 Identities = 149/540 (27%), Positives = 247/540 (45%), Gaps = 36/540 (6%)

Query: 210 LVVGAESSGKTALIHQYARERRDR------AAGSPWETSAARLIQGLTRDGSWQQALTTL 263
           L+VG    GKTA+    A+   D       A    +      L+ G    G +++    L
Sbjct: 215 LLVGEAGVGKTAIAEGLAKRIVDGQVPDLLAQSVVYSLDLGALLAGTKYRGDFEKRFKAL 274

Query: 264 CRELATR-EVVLYVGHLAELFEVGQYQGNSISLGDALREPLARGQLMVLAEATPAELSQI 322
             EL  R + +L++  +  +   G   G  +   + L+  L+ G++  +   T  E   I
Sbjct: 275 LGELRKRPQAILFIDEIHTIIGAGAASGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGI 334

Query: 323 DLRSPGFSALFQTLRLPELPEAEQERTMLAAVAA-LAAQHRVAVSPDAVSELIALQRRFS 381
             +    +  FQ + + E P  E    +L  +     + H +  S +A+     L  R+ 
Sbjct: 335 FEKDRALARRFQKVDVSE-PSVEDTVGILRGLKGRFESHHNIEYSDEALRAAAELASRYI 393

Query: 382 PYSGFPGKGIRFFEELILHVRGQQGA-------VIGRDDALAAFCAETGMPRRMLDARLP 434
                P K I   +E   + R Q  A       V   +D +A       +P + + +   
Sbjct: 394 NDRHMPDKAIDVIDEAGAYQRLQPEASRVKRIDVPQVEDIVAKIAR---IPPKHVTSSDK 450

Query: 435 LSLDEVDGFFRSRLFGQPEALSVVTNLLVATKAGLARGGKPIASMLLIGPTGVGKTETAK 494
             L  ++   +  +FGQ +A+  +   +  ++AGL    KP+ S L  GPTGVGKTE A+
Sbjct: 451 ELLRNLERDLKLTVFGQDQAIDSLATAIKLSRAGLKSPDKPVGSFLFAGPTGVGKTEAAR 510

Query: 495 ALAEFMFGDPRRMIRIDMSEYADPAAVLRLLGD----LGGDEG-VLIGAVRRQPFSVVLF 549
            LA+ +  +   ++R DMSEY +   V RL+G     +G D+G +L  A+ +QP  V+L 
Sbjct: 511 QLAKALGVE---LVRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTEAITKQPHCVLLL 567

Query: 550 DELEKAHPSFFDLLLQVLGEGRLTGGDGLTANFCGSFVVMTSNLGAEAMQRMPMGLGAVR 609
           DE+EKAHP  F+LLLQV+  G LT  +G  A+F    ++MT+N GAE   R    +G   
Sbjct: 568 DEIEKAHPEVFNLLLQVMDHGTLTDNNGRKADFRNVILIMTTNAGAETAAR--ASIGFTH 625

Query: 610 GDPRAHFEQAVQQALRPELFNRIDHIVPFAPLSATERAPIFGREMTLLRKREGLLERSAE 669
            D  +   + ++++  PE  NR+D I+ F  LS      I   +  L+  +  L ++   
Sbjct: 626 QDHASDAMEVIRKSFTPEFRNRLDTIIQFGRLSTETIKSIV--DKFLIELQAQLEDKRVL 683

Query: 670 LTLDDDVAARLAALPGDERYGARDVQRVLRRQLLLPLAH-----ALAPHAYVTPLAVRIG 724
           L + D+    LA    D + GAR + R+++ ++  PLA       LA H  V  + +R G
Sbjct: 684 LEVSDEARGWLAVSGYDVQMGARPMARLIQDKIKRPLAEEILFGELAEHGGVVHVDLRDG 743