Pairwise Alignments

Query, 1067 a.a., ClpB protein from Variovorax sp. SCN45

Subject, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

 Score =  202 bits (513), Expect = 1e-55
 Identities = 128/306 (41%), Positives = 177/306 (57%), Gaps = 13/306 (4%)

Query: 422 TGMP-RRMLDARLPLSLDEVDGFFRSRLFGQPEALSVVTNLLVATKAGLARGGKPIASML 480
           TG+P  +ML+      L +++     R+ GQ EA++ V N +  ++AGL+   +P  S L
Sbjct: 544 TGIPVAKMLEGEREKLL-KMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFL 602

Query: 481 LIGPTGVGKTETAKALAEFMFGDPRRMIRIDMSEYADPAAVLRLLGDLGG-----DEGVL 535
            +GPTGVGKTE  KALAEF+F     M+RIDMSE+ +  +V RL+G   G     + G L
Sbjct: 603 FLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYL 662

Query: 536 IGAVRRQPFSVVLFDELEKAHPSFFDLLLQVLGEGRLTGGDGLTANFCGSFVVMTSNLGA 595
             AVRR+P+SVVL DE+EKAHP  F++LLQVL +GRLT   G T +F  + +VMTSNLG+
Sbjct: 663 TEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGS 722

Query: 596 EAMQRMPMGLGAVRGDPRAHFEQAVQQALRPELFNRIDHIVPFAPLSATERAPIFGREMT 655
             +Q     L   R   RA    AV    RPE  NRID +V F PL   + A I   E+ 
Sbjct: 723 AQIQE----LVGDREAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGI--TEIQ 776

Query: 656 LLRKREGLLERSAELTLDDDVAARLAALPGDERYGARDVQRVLRRQLLLPLAHALAPHAY 715
           L R R  LLER   L+L  +   +L A+  D  YGAR ++R ++R +  PLA  +    +
Sbjct: 777 LGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKF 836

Query: 716 VTPLAV 721
           +   A+
Sbjct: 837 LPGTAI 842



 Score = 53.9 bits (128), Expect = 5e-11
 Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 9/207 (4%)

Query: 204 RFARSVLVVGAESSGKTALIHQYAR-----ERRDRAAGSPW-ETSAARLIQGLTRDGSWQ 257
           R   + +++G    GKTA+    A+     E  D   G          LI G    G ++
Sbjct: 197 RTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFE 256

Query: 258 QALTTLCRELATRE--VVLYVGHLAELFEVGQYQGNSISLGDALREPLARGQLMVLAEAT 315
           + L +L  EL+ +E  ++L++  L  +   G+ +G ++  G+ L+  LARG+L  +   T
Sbjct: 257 ERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEG-AMDAGNMLKPALARGELHCVGATT 315

Query: 316 PAELSQIDLRSPGFSALFQTLRLPELPEAEQERTMLAAVAALAAQHRVAVSPDAVSELIA 375
             E  Q   +       FQ + + E  E +    +          H+VA++  A+     
Sbjct: 316 LNEYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAK 375

Query: 376 LQRRFSPYSGFPGKGIRFFEELILHVR 402
           L  R+      P K I   +E    +R
Sbjct: 376 LSHRYITDRQLPDKAIDLIDEAASRIR 402



 Score = 28.1 bits (61), Expect = 0.003
 Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 20/102 (19%)

Query: 480 LLIGPTGVGKTETAKALAEFMFGDPRRMIRIDMSEYADPAAVLRLLG-DLGGDEGVLIGA 538
           +LIG  GVGKT  A+ LA+          RI   E  D     RLL  D+G    ++ GA
Sbjct: 203 VLIGEPGVGKTAIAEGLAQ----------RIINGEVPDGLKGKRLLALDMG---ALIAGA 249

Query: 539 VRRQPFS---VVLFDELEKAHPS---FFDLLLQVLGEGRLTG 574
             R  F      L +EL K       F D L  ++G G+  G
Sbjct: 250 KYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEG 291