Pairwise Alignments

Query, 1067 a.a., ClpB protein from Variovorax sp. SCN45

Subject, 758 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Erwinia tracheiphila SCR3

 Score =  172 bits (435), Expect = 1e-46
 Identities = 141/533 (26%), Positives = 238/533 (44%), Gaps = 26/533 (4%)

Query: 197 LQRAAE---GRFARSVLVVGAESSGKTALIHQYARE------RRDRAAGSPWETSAARLI 247
           L+RA +    R   + L+VG    GKTA+    A               + +      L+
Sbjct: 194 LERAVQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMKDATIYSLDIGSLL 253

Query: 248 QGLTRDGSWQQALTTLCRELAT-REVVLYVGHLAELFEVGQYQGNSISLGDALREPLARG 306
            G    G +++    L ++L      +L++  +  +   G   G  +   + ++  L+ G
Sbjct: 254 AGTKYRGDFEKRFKALLKQLEQDNSSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGG 313

Query: 307 QLMVLAEATPAELSQIDLRSPGFSALFQTLRLPELPEAEQERTMLAAVAALAAQHRVAVS 366
           ++ V+   T  E S I  +    +  FQ + + E    E  + +          H V  +
Sbjct: 314 KIRVMGSTTYQEFSNIFEKDRALARRFQKIDITEPSMDETVQIINGLKPKYETHHEVRYT 373

Query: 367 PDAVSELIALQRRFSPYSGFPGKGIRFFEELILHVR----GQQGAVIGRDDALAAFCAET 422
             AV   + L  ++      P K I   +E     R     ++   +   D  +      
Sbjct: 374 AKAVRAAVELSVKYINDRHLPDKAIDVIDEAGARARLIPVSKRKKTVNVSDIESVVARIA 433

Query: 423 GMPRRMLDARLPLSLDEVDGFFRSRLFGQPEALSVVTNLLVATKAGLARGGKPIASMLLI 482
            +P + + A    +L  +    +  +FGQ  A+  +T  +  ++AGL +  KP+ S L  
Sbjct: 434 RIPEKSVSATDRDTLRTLGDRLKMLVFGQDNAIETLTEAIKMSRAGLGQDRKPVGSFLFA 493

Query: 483 GPTGVGKTETAKALAEFMFGDPRRMIRIDMSEYADPAAVLRLLGD----LGGDEG-VLIG 537
           GPTGVGKTE    LA+ +  +   ++R DMSEY +   V RL+G     +G D+G +L  
Sbjct: 494 GPTGVGKTEVTVQLAKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 550

Query: 538 AVRRQPFSVVLFDELEKAHPSFFDLLLQVLGEGRLTGGDGLTANFCGSFVVMTSNLGAEA 597
           AV + P +VVL DE+EKAHP  F+LLLQV+  G LT  +G  A+F    VVMT+N G   
Sbjct: 551 AVIKHPHAVVLLDEIEKAHPDVFNLLLQVMDNGMLTDNNGRKADFRNVVVVMTTNAGVRE 610

Query: 598 MQRMPMGLGAVRGDPRAHFEQAVQQALRPELFNRIDHIVPFAPLSATERAPIFGREMTLL 657
            +R  +GL  ++ D      + +++   PE  NR+D+I+ F  L       +  + +  L
Sbjct: 611 TERKSIGL--IQQDNSTDAMEEIKKIFTPEFRNRLDNIIWFKHLDPEVIHQVVDKFIVEL 668

Query: 658 RKREGLLERSAELTLDDDVAARLAALPGDERYGARDVQRVLRRQLLLPLAHAL 710
           + +  L  +   L + D+    LA    D+  GAR + R ++  L  PLA+ L
Sbjct: 669 QAQ--LDAKGVSLEVSDEARDWLAEKGYDKAMGARPMARTVQENLKKPLANEL 719