Pairwise Alignments

Query, 869 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Variovorax sp. SCN45

Subject, 808 a.a., DNA gyrase subunit B from Xanthobacter sp. DMC5

 Score =  757 bits (1954), Expect = 0.0
 Identities = 437/859 (50%), Positives = 556/859 (64%), Gaps = 71/859 (8%)

Query: 25  AAADNSYGEGSITILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCDD 84
           A + + YG  SI +L+GL+AVRKRPGMYIGDT DG+GLHH+V+EVVDN+IDEALAG   +
Sbjct: 7   APSPDDYGAQSIQVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGWAKE 66

Query: 85  IVVTIHSDNSISVTDNGRGIPTGVKMDDKH-EPKRSAAEIALTELHAGGKFNQNSYKVSG 143
           + VT+ ++ S++VTD+GRGIPT     D H E   SAAE+ +T+LHAGGKFNQNSYKVSG
Sbjct: 67  VTVTLEANGSVTVTDDGRGIPT-----DLHPEEGVSAAEVIMTQLHAGGKFNQNSYKVSG 121

Query: 144 GLHGVGVSCVNALSVMLRLVVRREGKIHELEFSRGFVQNRLLETVSGVEVSPMKIIGDTD 203
           GLHGVGVS VNALS  L L + R+GK H + F  G  +            +P+K++G   
Sbjct: 122 GLHGVGVSVVNALSTTLDLTIWRDGKEHYMRFRHGDAE------------APLKVVGTAP 169

Query: 204 --KRGTEVHFLPDTQIFKENNDFHYEILSKRLRELSFLNNGVRIRLKDER--TGKEDDFS 259
             KRGT+V FLP  + F    +F Y  L  RLREL+FLN+GV I L D R    K ++  
Sbjct: 170 AGKRGTKVTFLPSPETFTRI-EFDYATLEHRLRELAFLNSGVLIVLTDARGPEPKREELH 228

Query: 260 GAGGVRGFVEFINKGKTVLHPNSFYAEGERPADTYGGIPGTHIGVEVAMQWNSGYNEQVL 319
             GGV  FV+++++ KT L         E+   T          VE A+ WN GY+E VL
Sbjct: 229 YEGGVEAFVKYLDRNKTALIAKPVVIRAEKDGIT----------VEAALSWNDGYHENVL 278

Query: 320 CFTNNIPQRDGGTHLTGLRAAMTRVINKYIEENEFAKKAKVEVTGDDMREGLCCVLSVKV 379
           CFTNNIPQRD GTH TG  AA+TR +  Y   +  +KK KV+ TG+D REGL  VLSVKV
Sbjct: 279 CFTNNIPQRDRGTHFTGFAAALTRQVLGYANTSGISKKEKVDPTGEDCREGLTAVLSVKV 338

Query: 380 PEPKFSSQTKDKLVSSEVRAPVEDIVGKLLTDYLQERPNDAKIICGKIVEAARAREAARK 439
           P+PKFSSQTKDKLVSSEVR  VE++VG+ L ++ +E P +AK + GK+VEAA AREAARK
Sbjct: 339 PDPKFSSQTKDKLVSSEVRPVVENLVGEALANWFEENPVEAKNVIGKVVEAAAAREAARK 398

Query: 440 AREMTRRKGVLDGMGLPGKLADCQEKDPALCEVYLVEGDSAGGSAKQGRDRKFQAILPLR 499
           AR++TRRK  LD   LPGKLADCQEKDPA  E+++VEGDSAGGSAKQGRDR FQA+LPLR
Sbjct: 399 ARDLTRRKSPLDVASLPGKLADCQEKDPAKSEIFIVEGDSAGGSAKQGRDRAFQAVLPLR 458

Query: 500 GKILNVEKARYEKLLTSNEILTMITALGTGIGRAGATTAGGGADDFNVAKLRYHRIIIMT 559
           GKILNVE+AR++K+L+S +I T+ITALGTGIGR          DDF++AKLRYH+IIIMT
Sbjct: 459 GKILNVERARFDKMLSSEQIGTLITALGTGIGR----------DDFDIAKLRYHKIIIMT 508

Query: 560 DADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKVGKEEQYLKDGPALDAFLL 619
           DADVDGAHIRTLLLTFF+RQMPE+V+ GH++IAQPPLYKV  GK E YLKD  AL+ +L+
Sbjct: 509 DADVDGAHIRTLLLTFFFRQMPEIVDAGHLFIAQPPLYKVARGKSETYLKDEKALEDYLI 568

Query: 620 KVALKDARIETGGASSTTLSGDTLAELAR-KHQVAEAVIARLRNFMDAEALRAIADGVAL 678
              L++A +    A+    +G  LA +     Q+  A+ A    +  A A +A   G   
Sbjct: 569 TTGLEEASLHL--ATGEVRTGADLAHVVDVSRQLRSALSALHPRYNRAVAEQAALAGAFA 626

Query: 679 DLDTTPAAEASAVALQAKLR--------ELNTTGVPAEVSSEFDARTDKPLLRISRRHHG 730
                 AA  SA A +   R        E   TG+  E    F +RT + +  ++R  H 
Sbjct: 627 PAALEDAATGSAAAAEVARRLDALADETERGWTGICDETGYVF-SRTVRGVAEVARLDHA 685

Query: 731 NIKSSVLTQDFVHGADYAALAEAANTFRGLLSPEGALVKRGEGERAKEEKVDDFRQAMKW 790
                     F+   +   L   A    G+ +   A +KR   E+     VD F      
Sbjct: 686 ----------FIASPEARRLDTLARDLDGVFA-AAATLKRRSDEQVLFGAVDLFDA---- 730

Query: 791 LISEAERATSRQRYKGLGEMNPEQLWETTMDPTVRRLLRVQIDDAIEADRVFTMLMGDEV 850
           +     +  S QRYKGLGEMNPEQLWETT+D   R LL+V++ +   AD +F+ LMGD V
Sbjct: 731 VTDSGRKGLSLQRYKGLGEMNPEQLWETTLDINARSLLQVRVKEVDAADDLFSRLMGDTV 790

Query: 851 EPRREFIEQNALRAANIDV 869
           EPRREFI++NALR A++DV
Sbjct: 791 EPRREFIQENALR-ASVDV 808