Pairwise Alignments

Query, 869 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Variovorax sp. SCN45

Subject, 838 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Sphingobium sp. HT1-2

 Score =  749 bits (1935), Expect = 0.0
 Identities = 426/869 (49%), Positives = 559/869 (64%), Gaps = 73/869 (8%)

Query: 29  NSYGEGSITILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVVDNSIDEALAGHCDDIVVT 88
           N YG  SI +L+GL+AVRKRPGMYIGDT DG+GLHH+VFEV DN+IDEALAGHCD IV+T
Sbjct: 15  NEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVSDNAIDEALAGHCDRIVIT 74

Query: 89  IHSDNSISVTDNGRGIPTGVKMDDKHEPKRSAAEIALTELHAGGKF----NQNSYKVSGG 144
           ++ DNS+SV DNGRGIPTG+  ++      SAAE+ +T+LHAGGKF    + N+YKVSGG
Sbjct: 75  LNPDNSVSVEDNGRGIPTGIHKEEGV----SAAEVIMTQLHAGGKFENTSDDNAYKVSGG 130

Query: 145 LHGVGVSCVNALSVMLRLVVRREGKIHELEFSRGFVQNRLLETVSGVEVSPMKIIGDTD- 203
           LHGVGVS VNALS  L L + R+GK H + F+ G               +P+K+IGD   
Sbjct: 131 LHGVGVSVVNALSEWLDLNIWRDGKEHWMRFAYGDA------------TAPLKVIGDAPE 178

Query: 204 -KRGTEVHFLPDTQ-------IFKENNDFHYEILSKRLRELSFLNNGVRIRLKDER--TG 253
            K+GT V FL  T+        FK   ++ ++ L  R REL+FLN+GVR+ L D R    
Sbjct: 179 GKKGTRVTFLASTEKVPGDGGTFKNQTEYDFDKLEHRYRELAFLNSGVRLFLVDARHEEK 238

Query: 254 KEDDFSGAGGVRGFVEFINKGKTVLHPNSFYAEGERPADTYGGIPGTHIGVEVAMQWNSG 313
           KE +    GG+  FV+++++ K  L P+     G R   T          ++VA++WN  
Sbjct: 239 KEVELYYEGGIAAFVKYLDRNKNALMPDPIAIAGTRDDVT----------IDVALEWNDS 288

Query: 314 YNEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEENEFAKKAKVEVTGDDMREGLCC 373
           Y E VLCFTNNIPQRDGGTHL   RAA+TR +N Y E+    KK KV +TG+DMREGL  
Sbjct: 289 YYENVLCFTNNIPQRDGGTHLAAFRAALTRTLNSYAEKTGLLKKEKVSLTGEDMREGLTA 348

Query: 374 VLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVGKLLTDYLQERPNDAKIICGKIVEAARA 433
           ++SVK+P+PKFSSQTKDKLVSSEVR P+E ++   + ++L+E P   K+I  K+++AA A
Sbjct: 349 IVSVKLPDPKFSSQTKDKLVSSEVRQPLESLMADKMAEWLEENPGHGKMIVQKVIDAAAA 408

Query: 434 REAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALCEVYLVEGDSAGGSAKQGRDRKFQ 493
           REAA++ARE+TRRKG +D   LPGKLADCQE+DPA  E++LVEGDSAGGSAKQGR+R  Q
Sbjct: 409 REAAKRARELTRRKGAMDIASLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRNRHNQ 468

Query: 494 AILPLRGKILNVEKARYEKLLTSNEILTMITALGTGIGRAGATTAGGGADDFNVAKLRYH 553
           AILPL+GKILNVE+AR++K+L+S E+ T+I A+GTGI            DDFN+ KLRYH
Sbjct: 469 AILPLKGKILNVERARFDKMLSSKEVGTLIQAMGTGI-----------RDDFNLDKLRYH 517

Query: 554 RIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKVGKEEQYLKDGPA 613
           +I+IMTDADVDGAHIRTLLLTFFYRQMP+++E GH++IAQPPLYK   G+ E YLKD  A
Sbjct: 518 KIVIMTDADVDGAHIRTLLLTFFYRQMPQIIEAGHLFIAQPPLYKASRGRSEVYLKDEAA 577

Query: 614 LDAFLLKVALKDARIETGGASSTTLSGDTLAELARKHQVAEAVIARLRNFMDAEALRAIA 673
           L+ +L+   +    +ET G + T   GD L  L    +   AV+  +    D   + A+ 
Sbjct: 578 LEQYLVDNGVDTMALETTGGART---GDDLRSLIDHARRMRAVMRYVPRRYDPAIIEALG 634

Query: 674 DGVALDLDTTPAAEASAVALQAKL-----RELNTTGVPAEVSSEFDARTDKPLLRISRRH 728
              ALD + + A  A  +A+          E   TG  AE       R  + +       
Sbjct: 635 LTGALDPELSEAQLAERLAMAVAWIASHDPEGKWTGRIAEGGGFHFERLWRGVTDHHVIE 694

Query: 729 HGNIKSSVLTQDFVHGADYAALAEAANTFRG--LLSPEGALVKRGEGE------RAKEEK 780
           HG + S+   +  +HG    A  EA +  +G  L+S +    +   GE       AK   
Sbjct: 695 HGFLGSAEARK--LHG---TASEEAESYAKGSRLVSAKAVAAQDELGEDELPAVSAKGVN 749

Query: 781 VDDFRQAMKWLISEAERATSRQRYKGLGEMNPEQLWETTMDPTVRRLLRVQIDDAIEADR 840
           +    + ++ ++S   +  S QRYKGLGEMN EQLWETT+DP  R +LRV+++ A  AD 
Sbjct: 750 ISRPSELLEAILSAGRKGLSIQRYKGLGEMNAEQLWETTLDPDNRSMLRVEVEQADVADE 809

Query: 841 VFTMLMGDEVEPRREFIEQNALRAANIDV 869
           +FT LMGD VEPRREFI+ NAL  AN+DV
Sbjct: 810 IFTKLMGDVVEPRREFIQDNALNVANLDV 838