Pairwise Alignments

Query, 459 a.a., Chromosomal replication initiator protein DnaA from Variovorax sp. SCN45

Subject, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

 Score =  442 bits (1138), Expect = e-129
 Identities = 235/502 (46%), Positives = 317/502 (63%), Gaps = 56/502 (11%)

Query: 10  LWQACVDQLAQELSEQQFNTWIKPLTAQVADDLSRMTVFVANRFKLDWIRAQYAGKIAAM 69
           LWQ CV+ L  EL  QQFNTWI+PL  +   D   + V+  NRF LDW+  +Y G++  +
Sbjct: 5   LWQQCVELLRDELPAQQFNTWIRPLQVEAEGD--ELRVYAPNRFVLDWVNEKYLGRLLEL 62

Query: 70  -AEKMYGQPVAIELALAPRET---------PVRSAPVAVMTETDVPRDVAGPGEEPAAAG 119
             E   G   A+ L +  R +         PV +A  A + +T   +       EP A  
Sbjct: 63  LGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVEPVAVA 122

Query: 120 --------------------------------------------FKNRLNSGLTFDTLVE 135
                                                         + LN   TFDT VE
Sbjct: 123 AAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDTFVE 182

Query: 136 GTANRMARAAAMHVAGMPGHLYNPLFIYGGVGLGKTHLMHAVGNRLLADRADSKVLYIHA 195
           G +N++ARAAA  VA  P H YNPLF+YGGVGLGKTHLMHAVGN LL    ++KV+Y+H+
Sbjct: 183 GKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHS 242

Query: 196 EQFVSDVVKAYQRKTFDEFKERYHSLDLLLIDDVQFFANKDRTQEEFFNAFEALLAKKSH 255
           E+FV+D+VKA Q    +EFK  Y S+D LLIDD+QFFA K+R+QEEFF+ F ALL     
Sbjct: 243 ERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQ 302

Query: 256 IVMTSDTYPKGLADIHERLVSRFDSGLTVAIEPPELEMRVAILINKARAESAEMPEEVAF 315
           +++TSD YPK +  + ERL SRF  GLTVA+EPPELE RVAIL+ KA     E+P + AF
Sbjct: 303 VILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAF 362

Query: 316 FVAKNVRSNVRELEGALRKILAYSRFNQKEISIALAREALRDLLSIQNRQISVENIQKTV 375
           F+A+ +RSNVRELEGAL++++A+S F  ++I+I L RE+L+DLL++Q++ +SV+NIQ+TV
Sbjct: 363 FIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTV 422

Query: 376 ADYYKIKVADMYSKKRPASIARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRK 435
           A+YYKIK++D+ SK+R  S+ARPRQ+AM L+KELT  SLPEIG++FGGRDHTTVLHA RK
Sbjct: 423 AEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRK 482

Query: 436 ISGERQQLTELNQQLHVLEQTL 457
           I+  ++   ++ +    L +TL
Sbjct: 483 INELKESDADIREDYKNLLRTL 504