Pairwise Alignments

Query, 468 a.a., tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE from Variovorax sp. SCN45

Subject, 487 a.a., GTPase Der from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 3e-15
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 8/148 (5%)

Query: 211 LQSQLAAVQQRAR-QGALLREGIKVVIAGQPNAGKSSLLNALAGAELAIVSAVAGTTRDV 269
           L+  +A  ++  R  G   ++GIK+ I G+PN GKS+L+N + G E  +V    GTTRD 
Sbjct: 171 LEQDVAEGEEAVRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVVVYDEPGTTRDS 230

Query: 270 VSQTIQIHGVPLHVADTAGLRESS---DEVEQIGVARAWGQIESADAVLFLHDLTRAALP 326
           +    +  G      DTAG+R+     +EVE+  V +    I+ A+ V+F+ D  R  + 
Sbjct: 231 IYIPFERDGEKYTFIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMD-AREGVV 289

Query: 327 DYAAADAEILAGLRRKLPASVPVLDVWN 354
           D+   D  +L        A V  L+ W+
Sbjct: 290 DH---DLNLLGFALEAGRAIVIALNKWD 314



 Score = 56.6 bits (135), Expect = 2e-12
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 234 VVIAGQPNAGKSSLLNALAGAELAIVSAVAGTTRDVVSQTIQIHGVPLHVADTAGLRESS 293
           + + G+PN GKS++ N L     AIV  ++G TRD         G    + DT G+    
Sbjct: 5   IALVGRPNVGKSTMFNRLTKTRDAIVGDLSGLTRDRQYGDASWQGRSFILIDTGGITGDE 64

Query: 294 DEVEQIGVARAWGQIESADAVLFLHDLTRAALPDYAAADAEILAGLRRKLPASVPVLDVW 353
             +++    ++   IE AD VLFL D  RA +    AAD  I   LR++  A++ V +  
Sbjct: 65  VGMDEKMAEQSLMAIEEADYVLFLVD-ARAGM---TAADQMIAEHLRKRNKAAILVANKI 120

Query: 354 NKQDAAPSTEPAE--------GIALSAKTGLGIEALREQLL 386
           +  D  P    AE         I ++   G GI AL E +L
Sbjct: 121 DNID--PDVARAEFSPMGMGNAIPVAGSQGRGINALMEAVL 159