Pairwise Alignments

Query, 337 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 691 a.a., DNA polymerase III, gamma subunit from Pseudomonas putida KT2440

 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 88/266 (33%), Positives = 118/266 (44%), Gaps = 42/266 (15%)

Query: 23  HAWLLQGPSGIGQYELALALASAWLCEQPTAEGTACGHCASCHAIEVRTHADLCVLMPEV 82
           HA+L  G  G+G+  +A  +A    CE      T CG C+ C  I+     DL       
Sbjct: 39  HAYLFTGTRGVGKTTIARIIAKCLNCETGITS-TPCGTCSVCREIDEGRFVDLI------ 91

Query: 83  AMQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFAQRTSARGRGKVVLVYPAERM 142
                          +ID     A+   +VE  R+ +   Q   +RGR KV L+     +
Sbjct: 92  ---------------EID-----AASRTKVEDTRELLDNVQYAPSRGRFKVYLIDEVHML 131

Query: 143 NTITANALLKTLEEPVGDVRFVLASEAAWQLLPTIRSRCLGFTL----PWPETAEAEAWL 198
           +T + NALLKTLEEP   V+F+LA+    +L  TI SRCL F+L    P          L
Sbjct: 132 STHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSPERVVEHLSHVL 191

Query: 199 AAQDVPAADAAALL--RAAGGRPSDALRLARSGQSPKAWSLLPKAMSRGDVGALADHAPA 256
           AA++VP  + A  L  RAA G   DA+ L     +     +L  A  R  +G+L DH   
Sbjct: 192 AAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVL-AADVRAMLGSL-DH--G 247

Query: 257 QAVGALQKLCHD-----LMAVGNGAE 277
           Q  G LQ L        L AV N AE
Sbjct: 248 QVYGVLQALLEGDARALLEAVRNLAE 273