Pairwise Alignments

Query, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  322 bits (824), Expect = 5e-92
 Identities = 180/426 (42%), Positives = 262/426 (61%), Gaps = 11/426 (2%)

Query: 215 ELQKRAFTDALTGLPNRVLFEDRLRHALARMNRANQLQVEECIAVLFVDLDGFKPINDSF 274
           +L   A  D LTGL NR+  EDRL  A  R +R  ++Q    +AV+++DLDGFK INDS 
Sbjct: 304 QLSINASHDGLTGLLNRLSLEDRLVQA-CRSSRQRKVQ----LAVMYIDLDGFKSINDSI 358

Query: 275 GHSAGDRILCVAAERLARNTRESDTVARIGGDEFLLLLEGVHDRAECAEAANRVLRALGE 334
           GH  GD++L   A+RL +  R +DTV R+GGDEF++LL  +    +    A R+L ++G+
Sbjct: 359 GHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDLLRDEDAVPVAERLLASIGK 418

Query: 335 PFNVQGKLLQIACSIGIVL---HPEQGEPDKLVANADAAMYEAKRAGGGNYVMFESHMGA 391
           P+ +QG  L ++ SIGI +   H EQ  P KL+  AD AMY+AK+ G  N+  + S +  
Sbjct: 419 PYCIQGIDLHVSTSIGITVSDGHIEQ--PMKLIQQADMAMYKAKQQGRNNFQWYTSDLNH 476

Query: 392 DAAKQLQLQSDLRRAVELKQFELYYQPKINGVGDSISGVEALVRWNHPQHGLIGPTEFIG 451
              +   L++DL++A++ + F L+YQP+I      + G+EAL+RW HP  G I P  FI 
Sbjct: 477 RVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPAVFIP 536

Query: 452 LAERFGLIVHLGDWILDEACRQIAQWQAQGTQ-MCVAVNLSVMQLREVDFVARVERALLR 510
           +AE  G I+ L  W+LD AC Q+     QG   + +AVN+S M  +   FV  ++  L +
Sbjct: 537 VAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQFVECIQAVLSK 596

Query: 511 HNVPASLLLCEITESVAMEDIKATQRTLEGLARVGVFLSIDDFGTGYSSLSHLRKLPARQ 570
           H + A  L  EITES+ + +++    TL  L  +GV +++DDFGTG+SSLS+L+ LP  +
Sbjct: 597 HGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSLSYLKCLPIDK 656

Query: 571 VKIDRSFVQDLQTKEDARAVIDAVIRLAHALGLSVVAEGVENEAQRDILLAMGCDELQGF 630
           +KIDRSF+QD+ T     A+   +I +AH L LSVVAEGVE   Q + L    CD LQG+
Sbjct: 657 IKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDILQGY 716

Query: 631 LFSRPL 636
            F+RP+
Sbjct: 717 YFARPM 722