Pairwise Alignments

Query, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  350 bits (898), Expect = e-100
 Identities = 188/447 (42%), Positives = 271/447 (60%), Gaps = 11/447 (2%)

Query: 207  AELTQANHELQKRAFTDALTGLPNRVLFEDRLRHALARMNRANQLQVEECIAVLFVDLDG 266
            +E   +   + + A+ DALT LPNR LF+DRL +AL +  R      +  + ++F+DLD 
Sbjct: 828  SERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQ-----KAWVVLMFLDLDR 882

Query: 267  FKPINDSFGHSAGDRILCVAAERLARNTRESDTVARIGGDEFLLLLEGVHDRA----ECA 322
            FKPINDS GH+AGDR+L   A RL     + DTVAR+GGDEF LLL+    R        
Sbjct: 883  FKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAI 942

Query: 323  EAANRVLRALGEPFNVQGKLLQIACSIGIVLHPEQG-EPDKLVANADAAMYEAKRAGGGN 381
              A  +L +L  PF ++ +   +  SIGI L P+ G E  +L+ NAD AMY AK  G  N
Sbjct: 943  HVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNN 1002

Query: 382  YVMFESHMGADAAKQLQLQSDLRRAVELKQFELYYQPKINGVGDSISGVEALVRWNHPQH 441
            +  +++ M A A ++L+L+SDLR A+E  +F LYYQP+ +G G  ++G EAL+RW HP  
Sbjct: 1003 FQFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTR 1062

Query: 442  GLIGPTEFIGLAERFGLIVHLGDWILDEACRQIAQWQAQGTQMC-VAVNLSVMQLREVDF 500
            GL+ P +FI + E  GL+V +GDW+L EA RQ+  W     ++  V+VN+S  Q  +   
Sbjct: 1063 GLVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQL 1122

Query: 501  VARVERALLRHNVPASLLLCEITESVAMEDIKATQRTLEGLARVGVFLSIDDFGTGYSSL 560
              R+   L    +P + L  E+TES+ M ++    + L  L  +G+ +++DDFGTGYSSL
Sbjct: 1123 GTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSL 1182

Query: 561  SHLRKLPARQVKIDRSFVQDLQTKEDARAVIDAVIRLAHALGLSVVAEGVENEAQRDILL 620
            ++L++ P   +KIDR+FV  L   E    +  A+I +AH+L L+V+AEGVE   Q + L 
Sbjct: 1183 NYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLR 1242

Query: 621  AMGCDELQGFLFSRPLPAGDLLDWFSN 647
              GCDE+QG+LF RP+PA      FSN
Sbjct: 1243 EHGCDEVQGYLFGRPMPAHQFEAQFSN 1269