Pairwise Alignments

Query, 653 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 684 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  345 bits (886), Expect = 3e-99
 Identities = 185/436 (42%), Positives = 269/436 (61%), Gaps = 7/436 (1%)

Query: 208 ELTQANHELQKRAFTDALTGLPNRVLFEDRLRHALARMNRANQLQVEECIAVLFVDLDGF 267
           E+ Q   ++ + A  D LTGLPNR L EDR+ HA+A   R N+      IA+LF D+D F
Sbjct: 223 EIDQRTEDIHQLANRDLLTGLPNRRLLEDRIGHAIALAGRQNR-----SIALLFADIDNF 277

Query: 268 KPINDSFGHSAGDRILCVAAERLARNTRESDTVARIGGDEFLLLLEGVHDRAECAEAANR 327
           K +ND+ GH  GD +L + A+R+    R  DTVAR GGDEF++++E ++   E A  A +
Sbjct: 278 KVVNDTLGHKQGDALLRIIADRIHDIMRGMDTVARWGGDEFVIVVESLNSAGEAASVAEK 337

Query: 328 VLRALGEPFNVQGKLLQIACSIGIVLHPEQG-EPDKLVANADAAMYEAKRAGGGNYVMFE 386
           ++  +G P  +   LL++  S+GI ++P+ G +   L+ NAD A++EAK  G   +  F+
Sbjct: 338 LIETIGVPVQLGSNLLRVGVSVGISMYPQDGADITTLIKNADMALFEAKGRGRNTFHFFD 397

Query: 387 SHMGADAAKQLQLQSDLRRAVELKQFELYYQPKINGVGDSISGVEALVRWNHPQHGLIGP 446
             M A A +++ ++  LR+A+   Q EL+YQPKI     +++GVEALVRW  P  GL+ P
Sbjct: 398 QAMNARALRRMDIEMALRQAIPQNQLELHYQPKIASASGALAGVEALVRWRRPGEGLVQP 457

Query: 447 TEFIGLAERFGLIVHLGDWILDEACRQIAQWQAQG-TQMCVAVNLSVMQLREVDFVARVE 505
            EFI LAE   LIV +G+W+L+EACRQI  W+A+G  ++ VAVNLS         V  + 
Sbjct: 458 DEFIPLAEESDLIVAVGEWVLNEACRQIRDWEARGFGEVAVAVNLSPRHFLHEKDVDGIF 517

Query: 506 RALLRHNVPASLLLCEITESVAMEDIKATQRTLEGLARVGVFLSIDDFGTGYSSLSHLRK 565
           R + +  V   L+  E+TES  M + +     L  L   G  ++IDDFG+GYSSLS+LR+
Sbjct: 518 RIVDQSGVRPDLIEVEVTESTFMHEPEKVIGYLNRLRDRGFGIAIDDFGSGYSSLSYLRR 577

Query: 566 LPARQVKIDRSFVQDLQTKEDARAVIDAVIRLAHALGLSVVAEGVENEAQRDILLAMGCD 625
           LP   +KIDR+FV D++   D   +I A+I +A+A+GL ++AEGVEN  Q + L    C 
Sbjct: 578 LPITTLKIDRAFVMDIEHNADNAEIIRAIIAMANAMGLGLIAEGVENRHQFEFLRHADCG 637

Query: 626 ELQGFLFSRPLPAGDL 641
            +QG+ FSRPLP  DL
Sbjct: 638 VVQGYYFSRPLPPADL 653