Pairwise Alignments

Query, 334 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 271 a.a., sigma factor sigB regulation protein rsbQ from Pseudomonas simiae WCS417

 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 47  RIQLDCRGSGSPTVVFESGLSIDGSLSWAPVQPQVAVHTRTCSYSRAGLMWSDPS---NA 103
           R  +   G+GS T+VF  G   + ++ W  + PQ +   R   Y   G   SD S    A
Sbjct: 6   RNNVSVMGNGSSTLVFSHGFGCNQAM-WNYLAPQFSERFRVVMYDLVGAGLSDLSAFDKA 64

Query: 104 PYSARQ-VAQDLHEALTRAGEQGPFVLVGQSMGGLYAVNFTQHFGDEVAGLVLVDPS 159
            YS+    A+DL+E +  A   GP +LV  S+  + +    +   + +A  V++ PS
Sbjct: 65  KYSSLDGYARDLNEIID-AFAVGPVILVSHSVSAMISTLADRQAPNRIAAHVMIGPS 120