Pairwise Alignments

Query, 1035 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 825 a.a., Outer membrane autotransporter from Pseudomonas putida KT2440

 Score =  223 bits (568), Expect = 4e-62
 Identities = 238/808 (29%), Positives = 340/808 (42%), Gaps = 135/808 (16%)

Query: 307  TGQITGGAGGAG-GSAGGAAGGIGTPGGGGD-----GGI--GLWSTGSGA-TITNTGGIT 357
            TG +T GAG      A G+ GG    G G D     GG+  G  + G G  T   +GG  
Sbjct: 72   TGDVTFGAGKDSIDMASGSVGGNVNQGAGIDDFVMSGGVIEGNLNQGDGLDTFHMSGGWI 131

Query: 358  GGA-----------GGAGGANSN---------GGASGANGAGGV---------GVMGSNL 388
             G            G  G  N           GG+   N              G +G N+
Sbjct: 132  KGTFDSGDYAEMDDGRIGNVNMRLDENTFIMRGGSVDRNVITAFDKDYIEVFEGNIGGNI 191

Query: 389  AITNSGS---IAGG-LGGDGVTRASAVEFTGGSNSLTLNTGNVLTGAVAIDSGATASVIA 444
            +++       + GG +GGD       V  + G++  T + G +  G V    G   +++ 
Sbjct: 192  SVSGGDDQVLVHGGQVGGD-------VLLSTGNDRFTWDGGRI-GGRVDAGPGDDTALLK 243

Query: 445  GADGLSVGSALLLGGTG----TFDTN-----GHNLSWTGPISGASGLVKNGAGTLTLSGT 495
            G     V S  L GG G    TFD +      H ++W         +  N    L L  T
Sbjct: 244  GLTP-EVLSITLDGGEGNDSLTFDASQPAGGAHYVNW-------ERVALNNGSRLALDDT 295

Query: 496  NTYAGSTSVNAGTLAAGAANTFSSA----SAFTVGSGATLDLAGHSQTVASLANSGTVSL 551
                 S S + G+LA  A++  +S     +AF  G  A            +++N+GT+ L
Sbjct: 296  LVLGDSNS-STGSLALDASSRITSRQGVITAFAPGQRA------------AISNAGTLDL 342

Query: 552  V-GSAPGTTLTVTGPWVGNGGTLRLGTALGDSSSASDRLILSGSTAIASGTTNVQITNLG 610
              G+     L + G + GN GTLRL + L    +ASDRL++S   AIA G+T V I NL 
Sbjct: 343  TAGNDAMGRLRIEGDYTGNNGTLRLNSVLAGDGAASDRLVVSRG-AIA-GSTQVLINNLN 400

Query: 611  GLGALTSGNGIEVISAINGATTTAQTTKSAFSLAGGHVDAGAYQYRLYAADASGAGDN-W 669
            G GA T+ NGI+V+ A NGAT+TA    +AF +    + AGAY YRL+    +   +N W
Sbjct: 401  GAGAATAQNGIQVVEARNGATSTA----TAF-VQTQRLSAGAYDYRLFKGGVTAGSENSW 455

Query: 670  YLRSTMTV------------DPVTGTPVTGGGTTSTGGSGGGSTSGGGVVVPTYRAEVPL 717
            YLRST+               PV    VT        G         G  +P YR EVP+
Sbjct: 456  YLRSTLVAPPAPAPVPAPGEPPVIAPAVTPPVAAPAPGQAELPAPVQGQSLPLYRPEVPV 515

Query: 718  YAALPEQLRQSNLAMLSNLHQRVGDDTGVSLSGGTNTATPEMGYRQAWARVISTDRTIGQ 777
            YAA P          L   HQR GD   + L G       E     +W +          
Sbjct: 516  YAAAPRGAAIIARQALGTFHQRQGDQ--LLLQG-------ESALPASWGQAYGGTLRQQW 566

Query: 778  SGTVSPGSSGRLTGFQAGTDLWANP-----NWRVGVYVGELEGDMRVNGFVGGLQNSLAG 832
            SGTVSP   G L GF+ G DL+A          VG+YV     D  V GF   + +   G
Sbjct: 567  SGTVSPSLDGDLYGFKVGQDLYAKVGDNGYRQHVGIYVSHSRLDADVKGFALAVHDRSVG 626

Query: 833  TNSLHSEYLGAYATWKNDSGLYVDGVLQ----AGRHRYTESPTLGFSSTGKGNSLLASVE 888
               L  + +G Y T     G Y+D VLQ     GR R     TL       G++  AS+E
Sbjct: 627  DLKLDGDSVGTYWTLVGPQGAYLDAVLQYTRLDGRARSERGDTLNLD----GHAWTASLE 682

Query: 889  VGQAFAIARDWVIEPQLQLVRQRLDLGDSSIIGALVQQNNHDGWLARAGVRIKGEIATPA 948
             G    ++  W +EPQ QL+ Q++ L  +    + +  +       R G+R++G     +
Sbjct: 683  SGYPITLSERWRVEPQAQLIAQKVALESARDSVSRISHDAQVELTGRLGLRLEGAFTGSS 742

Query: 949  GR-LQPYVRFNVYRSSSGTDVANFIGPAGATPIATRTGGTSTELATGATLQLTQSASLYA 1007
            GR LQP+ + N++    G D   F     A  I T    TS +L +G   Q+ ++ SL+ 
Sbjct: 743  GRLLQPFAQVNLWHGDGGRDTLTF---DDADKIKTDYRYTSVQLESGVVAQVNEALSLHG 799

Query: 1008 EIGKLWSAGGDTRIRSGIDASVGMKIRW 1035
              G  ++A  D+R +    + V + +RW
Sbjct: 800  --GVQYTANLDSRQQEA--SGVNLGVRW 823