Pairwise Alignments

Query, 506 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  218 bits (556), Expect = 3e-61
 Identities = 169/517 (32%), Positives = 244/517 (47%), Gaps = 52/517 (10%)

Query: 31  GQHLTYGELARGCRRVAAVLHG-AGARPGDTISVVMPNGLQTLRLLLGAMHGGLRVNPVN 89
           G  L+Y EL R     AA L      +PG+ I+V MPN LQ    + GAM  GL V   N
Sbjct: 47  GVTLSYAELERHSAAFAAWLQQHTDLKPGERIAVQMPNVLQYPIAVFGAMRAGLIVVNTN 106

Query: 90  LLSQPEQMRYVLAHADCRVVCVAPEWEARVREIVQAFDRPVTVLVVDPEAEVLPG----- 144
            L    +MR+    +  R +     +  RV+E++   D  +  L+     ++LP      
Sbjct: 107 PLYTEREMRHQFKDSGARALVYLNMFGKRVQEVLP--DTGIEYLIEAKMGDLLPAAKGWL 164

Query: 145 --------ETEAPAVAVPPPLP--------------------DAVALLMYTSGTTGMPKG 176
                   +   PA  +P  +P                    D +A+L YT GTTG+ KG
Sbjct: 165 VNTVVDKLKKMVPAYRLPQAVPFKQVLREGRGLSPKPVSLNLDDIAVLQYTGGTTGLAKG 224

Query: 177 VMLSQRNLAANAYAISA---EHG------LRSSDRVL-AVLPLYHINAFTVTMLAPLAHG 226
            ML+  NL AN   + A   +HG      L+    V+ A LPLYHI AFT   +  +  G
Sbjct: 225 AMLTHGNLVANMLQVLACFSQHGPDGQKLLKDGQEVMIAPLPLYHIYAFTANCMCMMVTG 284

Query: 227 GS--LAMPPKFSAGRFWEQATQTQCSWINLVPTMISYLLEGPKPPLAQTLAIRFCRSASA 284
               L   P+   G F ++  + + S +  + T+   L++ P        A++   S   
Sbjct: 285 NHNVLITNPRDIPG-FIKELGKWRFSALLGLNTLFVALMDHPGFRQLDFSALKVTNSGGT 343

Query: 285 ALPPEHLRAFEQKFGIGIVETMGLTETAAPSFSNPMDPAARKLGSVG-RASGCMAGVVDA 343
           AL       +E   G  IVE  GLTET+  + +NP    AR LG+VG   +G    V+D 
Sbjct: 344 ALVKATAERWEDLTGCRIVEGYGLTETSPVASTNPYGQLAR-LGTVGIPVAGTAFKVIDD 402

Query: 344 KLSAVPDGVTGELVIRGPNVMLGYYKNEEATRASFTPDGWLRTGDLGHRDEDGFFFVTGR 403
             + +P G  GEL I+GP VM GY++  EAT  +   +GW +TGD+   D DGF  +  R
Sbjct: 403 DGNELPLGERGELCIKGPQVMKGYWQQPEATAQALDAEGWFKTGDIAVIDPDGFTRIVDR 462

Query: 404 IKELIIKGGENIAPREIDEALMRHPAVREAAAVGVPDRHYGQEIGVCIVLREGCACTEDE 463
            K++II  G N+ P EI++ +M HP V   AA+GVPD   G+ + + +V REG   + DE
Sbjct: 463 KKDMIIVSGFNVYPNEIEDVVMGHPKVANCAAIGVPDERSGEAVKLFVVPREG-GLSVDE 521

Query: 464 LRAFGAEALGRYKTPGHYRFVNDLPRGPSGKVQRLKL 500
           L+A+       YK P H      LP  P GK+ R +L
Sbjct: 522 LKAYCKANFTGYKVPKHIVLRESLPMTPVGKILRREL 558