Pairwise Alignments

Query, 506 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 4e-62
 Identities = 156/504 (30%), Positives = 236/504 (46%), Gaps = 34/504 (6%)

Query: 31  GQHLTYGELARGCRRVAAVLHGAGARPGDTISVVMPNGLQTLRLLLGAMHGGLRVNPVNL 90
           G   ++ +LA      A  L   G   GD + +  PN  Q   L L +   G  +  +N 
Sbjct: 43  GLRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINP 102

Query: 91  LSQPEQMRYVLAHADCR-VVCV----APEWEARVREIVQAFD---------------RPV 130
             +  ++ YVL  + CR +VC       ++   V+E+V                   R V
Sbjct: 103 AYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELASAAPGELASECLPELRGV 162

Query: 131 TVLVVDPEAEVLP--------GETEAPAVAVPPPLP--DAVALLMYTSGTTGMPKGVMLS 180
             L  +P A  LP        G+T   A          D    + YTSGTTG PKG  LS
Sbjct: 163 ISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKGATLS 222

Query: 181 QRNLAANAYAISAEHGLRSSDRVLAVLPLYHINAFTVTMLAPLAHGGSLAMP-PKFSAGR 239
             N+  N + +    GL + DR++  +PLYH     +  L  + HG ++  P   F A  
Sbjct: 223 HYNILNNGFMVGESLGLTARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAEL 282

Query: 240 FWEQATQTQCSWINLVPTMISYLLEGPKPPLAQTLAIRFCRSASAALPPEHLRAFEQKFG 299
                 + + + +  VPTM   +L+ P         +R    A A  P E +R    +  
Sbjct: 283 TLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRRVIDQMH 342

Query: 300 IGIVE-TMGLTETAAPSF-SNPMDPAARKLGSVGRASGCMAG-VVDAKLSAVPDGVTGEL 356
           +  V+   G+TET+  S  + P D    ++ +VGR    +   +VDA    VP G  GEL
Sbjct: 343 MAEVQIAYGMTETSPVSLQTGPDDDLELRVTTVGRTQPQLENKLVDADGCIVPRGEIGEL 402

Query: 357 VIRGPNVMLGYYKNEEATRASFTPDGWLRTGDLGHRDEDGFFFVTGRIKELIIKGGENIA 416
             RG +VMLGY+ N +AT  +  P GW+ +GDL   DE G+  + GR K++II+GGENI 
Sbjct: 403 CTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIY 462

Query: 417 PREIDEALMRHPAVREAAAVGVPDRHYGQEIGVCIVLREGCACTEDELRAFGAEALGRYK 476
           PRE++E    HPAV +A  +G+P   YG+EI   I L  G + T +EL+ +    +  +K
Sbjct: 463 PRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATVEELQGWCKARIAHFK 522

Query: 477 TPGHYRFVNDLPRGPSGKVQRLKL 500
            P + RFV++ P   +GKVQ+ ++
Sbjct: 523 VPRYIRFVDEYPMTVTGKVQKFRM 546