Pairwise Alignments

Query, 461 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 454 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  154 bits (390), Expect = 4e-42
 Identities = 133/457 (29%), Positives = 210/457 (45%), Gaps = 19/457 (4%)

Query: 10  VRRVALSLLLAFTLAWLAVVVYLYV---SFRLTMHTDSGVVRVGREL----NTTLAEIQR 62
           +RR  L+L++   L  L V+  L +   +  +    D+ + +  R L    +  LA   +
Sbjct: 4   IRRRTLTLIIGLLLTGLLVISVLNLHDSNHEIAEVYDAQLAQNARLLQGVMSLPLASKDQ 63

Query: 63  EDVAAAVIDALARQINAMRVAEADLPGDVVFMLRNREGKLLY---ESPGIAGRTLRGEPD 119
            D+  A   AL   I   +V        + F + + +G+LL     +P  A    +    
Sbjct: 64  ADLYRAFNKALGEAIP--KVDGHPYESKIAFQVWSPKGELLVFTASAPSFAVPPAQPGYS 121

Query: 120 RMVDAVVENQRYWLYEGRSERWTVWVAEPNGGLSWVLMFIGSSIFMPFLIAFPFVLAPVW 179
            + D      R ++ + +     +WV E +   S ++  I      P ++    + A VW
Sbjct: 122 NIDDLNGREWRGFVLKDKDNGLRIWVGERDDVRSDLVQRIVRHTLWPNVLGSLILAAMVW 181

Query: 180 IAAAQGLKPLRVLGERIDTRSAEDLSPLGFEPRHAELVPLVKAIEGLLAQLRGKVERERS 239
           +A   GLKPL  +   +  R +  L P+   P   EL P+  A+  +LAQ++  + RER 
Sbjct: 182 LAIGWGLKPLADMAATLRARHSGSLEPMQLTPLPTELEPMQAALNRMLAQIQEMLGRERR 241

Query: 240 FVNDAAHELRTPLAVIGAQAHVLARSSDPREREEAARHLTHAIARGSHLIQQLLELATMD 299
           F+ DAAHE+RTPLAV+   A  L  +    ER E+   L   + R S L+ QLL +A ++
Sbjct: 242 FIADAAHEMRTPLAVLRVHAQNLLEAGTEAERRESLAFLITGVDRTSRLVSQLLTMARLE 301

Query: 300 -GGERPAVQRIDVAELMRHHLAQASKDADARRLELVLESPDSLAFDLPVP-LFESVLRNL 357
               +  +Q ID+A  +R  L Q +    ++ LELV  + D+       P      L NL
Sbjct: 302 PSAGQLTLQTIDLATTVRETLIQLTPWLLSKGLELVFNADDAPYRVTTDPGAINIALTNL 361

Query: 358 LDNALKYVDAGGQIVVTLRQSADGLLLSVVDNGPGIPREEHALVFERFH-RGAGTSTQGT 416
           + NA  +    G I V L Q A   +L+V D GPGI   +   +FE F+ RG   + +G 
Sbjct: 362 VTNAANFSPEHGVITVKLSQDAKRFVLTVDDQGPGIDESQRERLFELFYSRG---NPEGA 418

Query: 417 GLGLAIARQACQRMGGTVELAHGPGGRGCAFTVLVPR 453
           GLGL I     Q +GG V L +   G G   T+ +PR
Sbjct: 419 GLGLTIVHTIAQHLGGRVHLENLASG-GLRATLEIPR 454