Pairwise Alignments

Query, 461 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 461 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  147 bits (372), Expect = 5e-40
 Identities = 93/266 (34%), Positives = 136/266 (51%), Gaps = 8/266 (3%)

Query: 178 VWIAAAQGLKPLRVLGERIDTRSAEDLSPLGFEPRHAELVPLVKAIEGLLAQLRGKVERE 237
           VW A +  L+PL  L   ++ R  +DL PL       E  PLV+++     +LRG+ ER+
Sbjct: 186 VWFAVSAALRPLERLRTAVEERQPDDLRPLPLVEVQHEFGPLVRSLNHFTERLRGQFERQ 245

Query: 238 RSFVNDAAHELRTPLAVIGAQAHVLARSSDPREREEAARHLTHAIARGSHLIQQLLELAT 297
             F+ DAAHELRTPLA + A+  +  R+ DP               R +HL  QLL LA 
Sbjct: 246 AQFIADAAHELRTPLAALKARLELGLRAEDPATWRSTLETAAQGTDRLTHLANQLLSLAR 305

Query: 298 MDGGERP----AVQRIDVAELMRHHLAQASKDADARRLELVLESPDSLAFDLPVPLFESV 353
           ++ G R       Q +D+++L R      +  A AR + L LE+ + +       L   +
Sbjct: 306 IENGARAIAEGGAQLLDLSQLARELGMAMAPLAHARGVALALEADEPVWLRGEPTLLNEL 365

Query: 354 LRNLLDNALKYVDAGGQIVVTLRQSADGLLLSVVDNGPGIPREEHALVFERFHRGAGTST 413
           L NL+DNAL +   GG +++ +   A   +L V D+GPGIP +E   VFERF+R      
Sbjct: 366 LSNLVDNALAHTSPGGNVILRVTAPA---VLEVEDDGPGIPLDERDRVFERFYR-RSQQG 421

Query: 414 QGTGLGLAIARQACQRMGGTVELAHG 439
            G+GLGLAI  + C+     + L  G
Sbjct: 422 MGSGLGLAIVGEICRAHLAQISLHDG 447