Pairwise Alignments

Query, 461 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 440 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 4e-35
 Identities = 134/462 (29%), Positives = 202/462 (43%), Gaps = 45/462 (9%)

Query: 12  RVALSLLL--AFTLAWLAVVVYLYVSFRLTM--HTDSGVVRVGRELNTTLAEIQREDVAA 67
           RV LSL+L  AF + W     ++    R  M    D  +V   R +   + ++ +   A 
Sbjct: 4   RVRLSLILGSAFVIIWALAAAWMLRDLRQQMMFSLDQRLVASARMVAGLIDQLPQPLTAK 63

Query: 68  -----------AVIDALARQINAMRVAEADLPGDVVFMLRNREGKLLYESPGIAGRTLRG 116
                      +V D +A Q++++R       G+++      +G +  E  G   +T+  
Sbjct: 64  GGEAHFSADQFSVPDGMACQVSSLR-------GEILASNHKHDGAMDDERSGFRDQTIDD 116

Query: 117 EPDRMVDAVVENQRYWLYEGRSERWTVWVAEPNGGLSWVLMFIGSSIFMPFLIAFPFVLA 176
              R       + R    +   ER           L+  ++   S+   P L+A    L 
Sbjct: 117 ALWRTFTYNHGDVRITTADRHMER---------EALNQSILLAASA---PVLMALLGSLG 164

Query: 177 PVWIAAAQGLKPLRVLGERIDTRSAEDLSPLGFEPRHAELVPLVKAIEGLLAQLRGKVER 236
            +WI   +GL+PL  + + +  R A+ + PL      +EL PL++    L  ++   +ER
Sbjct: 165 LLWIGLGKGLEPLNRMRDALRRRRADSVEPLQVAGMPSELQPLLETQNQLFLRIAQTLER 224

Query: 237 ERSFVNDAAHELRTPLAVIGAQAHVLARSSDPREREEAARHLTHAIARGSHLIQQLLELA 296
           ER   +DAAHELR+PL  I     V AR +D   RE+A  H      R    ++QLL LA
Sbjct: 225 ERRLTDDAAHELRSPLTAIKTHLQV-ARMTDGAVREQALEHAEQGTDRMHRTLEQLLMLA 283

Query: 297 TMDGGERPAVQRIDVAELMRHHLAQASKDADARRLELVL-ESPDSLAFDLPVPLFESVLR 355
            ++G           AE +     Q +   D RR+ L L E    +   +P PL  + LR
Sbjct: 284 RVEGSLSFEDGVQCSAEQVARQAVQDAGGGDNRRILLRLPEEATQIYLGMPAPLAVAALR 343

Query: 356 NLLDNALKYVDAGGQIVVTLR-QSADGLL-LSVVDNGPGIPREEHALVFERFHRGAGTST 413
           NLLDNAL++   GG   V L  Q ADG +   V D+GPGI   +   + ERF R     +
Sbjct: 344 NLLDNALRH---GGDEAVELEVQMADGQVGFMVRDHGPGIAEADLEHLTERFWRNG--QS 398

Query: 414 QGTGLGLAIARQACQRMGGTVELAHGPGGRGCAFTVLVPRRP 455
            G GLGLAI +   QR  G+  L       G    + VP RP
Sbjct: 399 GGCGLGLAIVQAIVQRCAGS--LRFDSRSDGLRVLLQVPARP 438