Pairwise Alignments

Query, 461 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 449 a.a., sensory histidine kinase in two-component regulatory system with QseB (NCBI) from Escherichia coli BW25113

 Score =  142 bits (357), Expect = 3e-38
 Identities = 132/476 (27%), Positives = 216/476 (45%), Gaps = 69/476 (14%)

Query: 1   MNWLLRRSLVRRVALSLLLAFTLAWL--AVVVYLYVSFRLTMHTDSGVVRVGRELNTTLA 58
           M +  R SL  R+ L  L+  ++ WL  + V +   +  +    D+ ++   + L+T   
Sbjct: 1   MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELFDTQLMLFAKRLST--- 57

Query: 59  EIQREDVAAAVIDALARQINAMRVAEADLPGDVVFMLRNREGKLL-------------YE 105
            +   ++ AA  D +A+  N ++    D    + F +   +G+++             Y+
Sbjct: 58  -LDLNEINAA--DRMAQTPNRLKHGHVD-DDALTFAIFTHDGRMVLNDGDNGEDIPYSYQ 113

Query: 106 SPGIAGRTLRGEPDRMVDAVVENQRYWLYEGRSERWTVWVAEPNG------GLSW----- 154
             G A   L GE D            W +        VW+  P+G      G  W     
Sbjct: 114 REGFADGQLVGEDDP-----------WRF--------VWMTSPDGKYRIVVGQEWEYRED 154

Query: 155 VLMFIGSSIFMPFLIAFPFVLAPVWIAAAQGLKPLRVLGERIDTRSAEDLSPLGFEPRHA 214
           + + I +   +P+L+A P +L  + +   + L PL  L   +  R  +   PL      +
Sbjct: 155 MALAIVAGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPS 214

Query: 215 ELVPLVKAIEGLLAQLRGKVERERSFVNDAAHELRTPLAVIGAQAHVLARS-SDPREREE 273
           E+ PLV+++  L A+    + RER F +DAAHELR+PL  +  Q  V   S  DP+ R++
Sbjct: 215 EVRPLVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKK 274

Query: 274 AARHLTHAIARGSHLIQQLLELATMDG-------GERPAVQRIDVAELMRHHLAQASKDA 326
           A   L   I R + L+ QLL L+ +D         E P    +  + +  +H AQ +K  
Sbjct: 275 ALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAK-I 333

Query: 327 DARRLELVLESPDSLAFDLPVPLFESVLRNLLDNALKYVDAGGQIVVTLRQSADGLLLSV 386
           D R   L L +        P+ L   ++RNLLDNA++Y   G  + VTL  +AD  +  V
Sbjct: 334 DVR---LTLNAHSIKRTGQPL-LLSLLVRNLLDNAVRYSPQGSVVDVTL--NADNFI--V 385

Query: 387 VDNGPGIPREEHALVFERFHRGAGTSTQGTGLGLAIARQACQRMGGTVELAHGPGG 442
            DNGPG+  E  A + ERF+R  G +  G+GLGL+I ++  +  G  VE  +   G
Sbjct: 386 RDNGPGVTPEALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQG 441