Pairwise Alignments

Query, 1485 a.a., T6SS PAAR-repeat protein / RhaS protein from Variovorax sp. SCN45

Subject, 1385 a.a., Rhs-related protein from Pseudomonas putida KT2440

 Score =  722 bits (1863), Expect = 0.0
 Identities = 515/1486 (34%), Positives = 724/1486 (48%), Gaps = 170/1486 (11%)

Query: 6    AARLHDPIAHTNAHARFWAKFAGGLIGGIAVGFAVGVAAAAVVGTGGLAGPLVAGAVVVG 65
            AAR  D I+HT+A         GG + G A+G A+    A    T G    L+AG     
Sbjct: 4    AARFGDEISHTSA--------LGGFLIGAALGIALVATVAIATFTCGFGVALLAGL---- 51

Query: 66   ARMAGGYLGASLGESIADALVPETLTVTGMITSGSSDVFIDSKAIGAARASPEMPMDTVS 125
            A   GG L  + GE+I         + +G IT+ S +VFI+S+   AAR    +     +
Sbjct: 52   AAGIGGSLLTAAGEAIGSMFS----SPSGTITTASPNVFINSRK--AARVEKSIG----A 101

Query: 126  CKKDSPQILLAEGAETVFVNMGVASRKDDHTECGAKVSEGSPTVFIGGPTARVREVADEV 185
            C K    + +AEG+  VF+N   A+RK D   CGA +S GS  V IGG T R   V DEV
Sbjct: 102  CDKHPGPVQIAEGSTNVFINSVAAARKGDKLTCGATISGGSDNVIIGGGTYRYLPVDDEV 161

Query: 186  PLISKVLVTIFNLVM-IYRGLRCLPKLARQG--KNALPCLIEGAVGLGMG---------- 232
            P   +  V +   +     G+  L K   Q   K  +PC ++   G   G          
Sbjct: 162  PEWLRTTVDVLMAIAGAAGGIAQLIKAGTQAGMKAVMPCALKFTAGFVAGEVASRYVVEP 221

Query: 233  -----IHGLVSSFGNPVHAATGGKFLGGESELDFTLPGPLPIAWQRFYSSHDLRRDGALG 287
                 I GLV   GNPV   TG K +    E+DF+LPG +PI W RFY+S DL  D  LG
Sbjct: 222  VARKAIGGLV---GNPVDLTTGRKLI--PDEIDFSLPGLMPIEWSRFYAS-DLTVDSVLG 275

Query: 288  QGWSLPYAMELRLGSDEESQPIVTLIDEQRRPMVLPGIEPGTRQYSLRDGLDLCRTEGGH 347
            +GW LP+   LR          + L D Q R +    ++PG R Y+  + + L  TEGGH
Sbjct: 276  RGWVLPWEQSLR-----RQGAFIYLTDNQGREVPFVTLQPGQRIYNPHEQVYLVCTEGGH 330

Query: 348  YFIHVPGGLFFMFAPPAEGEAHAQTLKLARIEDRNGNFIDLRHDALGRLAELTDSTGRLL 407
            Y +     LFF F    +       + L RIE+  G+F+       G L +++ + G  +
Sbjct: 331  YILQTLDNLFFYFGEVPDTNTE---VPLQRIENVLGHFLHFTRTPDGTLTDISATGGTRV 387

Query: 408  ALDYAGESRQLRAVRLAAGAPGELPGVLVAYRHDSEGRLLDVTDRNGAVARRFGYDAQGL 467
             L Y     +L  ++       E    L  YR+D  G+L  V +RNG   R F Y A GL
Sbjct: 388  HLHYDNPLGRLTDIKRVVN--NEAVETLTQYRYDEHGQLSAVINRNGDTVRSFSY-ADGL 444

Query: 468  MNFHADAAGLECRYEWQGTAGDAHVARHWTNDGESYTVRRMPPAADDALALGQTLVVDQL 527
            M  H++A GL C Y WQ       V  HWT+DGE Y  R         L    +   D L
Sbjct: 445  MVTHSNALGLGCHYRWQTLGDKPRVVEHWTSDGEHYHFRY-------DLDSRTSWATDVL 497

Query: 528  GREFAWHWNADLQVTDYADAAGRQWHAEYNELRQLVAITEPGGATTRCTYDPMGFMSSRT 587
            GRE    +NAD +V    D  G ++  E +E   +V +T P G   +  YD    +   T
Sbjct: 498  GRELEVQYNADHRVVASRDYGGERYAIELDEHGNMVGLTLPDGNRLQFKYDEFSRLLEET 557

Query: 588  DALGRTQSTGWTEFGEPWRETLA------DGSTWTYAYSDQGNLVRETDPLGRTTEYAYD 641
            D LGR      T++      TL       DGSTW   + D+GNL+ E D LG+ TEY   
Sbjct: 558  DPLGRK-----TQYEYHHLTTLVTQVSYPDGSTWRARFDDKGNLLAEFDALGQMTEYLNS 612

Query: 642  RRGLPIVVTDGKGGTNRMAWNECAQLVSLTDCSGKTTRYTYDGWCHLQTVTDAAGQRTRL 701
              GLP  + D    +  + WN  AQ+    DCSGK+T Y YD   HL  VTDA  Q T L
Sbjct: 613  DDGLPHTIIDATYKSKYLWWNTLAQVERYQDCSGKSTYYRYDERQHLVAVTDALNQTTTL 672

Query: 702  THDAMGRLLSVSLPDQSHQSFRRDAAGRIVAATDALSRSTQFAFGLRGQPLTRQDAEGRR 761
                 G +L +S PD + +SF  +  G++++ TD   ++T+     RG P +RQDA+G+R
Sbjct: 673  ARKPDGEVLRISHPDGTTESFTYNVYGQVLSHTDGKGQTTRLMRTARGLPSSRQDAKGQR 732

Query: 762  IAWHYDSAQRLQSLVNENGLHFEFIRDTADRVVEERRVGGTRVQVEYDANGWPVCITHVP 821
            + + YD A RL +LVNEN   + F  D +DR+ EE RV     +  YD  G         
Sbjct: 733  VRYEYDKAMRLTALVNENNATYSFAYDASDRLSEEVRVDNLTRRFSYDVGG--------- 783

Query: 822  GIGDEDLALHDGTGPRPAASRPLRTELL-RDAVGRLVAKRTGSHHYRYTYDLLDRLTEAV 880
                  L   D  G    A RP R  L  RDA+GRL+AK       R+TYD  DRL   +
Sbjct: 784  -----HLTRLDEIGYGENAERPERHTLFERDAIGRLIAKLNSDAQQRFTYDDGDRL---L 835

Query: 881  KLEAPRPGTRDEPRALHRTV-FAYDKLGRLIEETAIDETTGETHTLRHAHDELGNRTQTV 939
             +E    G   +       + +AYD LGRL +E + D T G      + +D L N T   
Sbjct: 836  SIERQPTGIGKQLGITEEKLEYAYDLLGRLTKEISPDGTLG------YEYDPLSNLTTLT 889

Query: 940  LPAIASQPGVQRALNYLYYGSGHLHQVNLSHQHGNAPEVHQLISDIERDDLHREVARSQG 999
            LP         R +N+LYYGSGHLHQ+NL           Q+ISD+ERDDLHREV R+QG
Sbjct: 890  LPD-------GRKVNHLYYGSGHLHQLNLD---------GQVISDMERDDLHREVYRTQG 933

Query: 1000 ALHTRFVLDPLGRRAASWCRAGGLDTAFTTQDPSWRQAIDSAGTPGARLLD----GLMKE 1055
             L + F  D +GR+A  W  A  L     +Q       + + G   + L++     + + 
Sbjct: 934  KLTSCFGYDAMGRKA--WQFASTLPADKLSQ-------VHNTGINTSLLVEHAYNPIHRR 984

Query: 1056 YSYDPVGELRQSRHSLQGTTAHRFDATGRIEQTVRGAAAANSERFAYDPAGNLLDASSTA 1115
            Y YDP GEL ++   L+G   + ++A G++     G +   SE F YDPA N LD ++  
Sbjct: 985  YQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDTG-SLIGSEEFRYDPAANRLDFNARQ 1043

Query: 1116 PGHVRDNLVRVFEDKRYSYDGHGRLVRKRAGRHTDQRFEWDEESRLVAVHTTRRPGTPEA 1175
               V+DN ++ + D+ Y YD  G L+ KR+G    Q F +D E+RLV   T    G  E+
Sbjct: 1044 FDKVKDNRIKQWRDQEYRYDPWGNLIEKRSGHSKLQHFSYDCENRLVRAETLVN-GKLES 1102

Query: 1176 TTQLTRFDYDAMGRRVAKHDAFG----STRFIWEGMRLIEERRGSQVVSYVYEPGGHVLM 1231
              +   + YD++GRR+AK           RF+W+G+R++ E    Q + Y+YEPG +  +
Sbjct: 1103 QGE---YRYDSLGRRIAKQAEINGEVEQKRFLWQGLRMLREETPGQSILYLYEPGSYAPL 1159

Query: 1232 ARLDAKAEPAEASATAQVFHFHNDTAGLPEELSNTEGQLCWRASYRTWGATVTEQWEVTA 1291
            AR+D      +     +V++FH D  G P EL+++EG++ W+A+YR+WG   T       
Sbjct: 1160 ARVDQVEGEGQ-----KVYYFHTDQIGTPLELTDSEGEIVWQATYRSWGTIET------- 1207

Query: 1292 LNGRAVASTDTVPQAIEQNLRFQGQYLDRDTGLHYNTFRFYDPDIGRFIGPDPIGLMGGS 1351
                         + ++QNLRFQGQY D +TGLHYNTFR+Y  ++GR++  DPIGL GG 
Sbjct: 1208 ----------LSIKEVDQNLRFQGQYFDAETGLHYNTFRYYYSEVGRYVTQDPIGLDGGL 1257

Query: 1352 NLHQYAPNPSRWIDPLGLS--YCAFGNASKPRAPRPGKDIA-VDADGMVKSQAGKQFPEG 1408
            NL++Y  NP+ WIDP G      A  N  K  A  P +  +  +   M + +A K   E 
Sbjct: 1258 NLYRYGQNPAGWIDPWGWECWSTARKNYWKAEAKAPTRAYSPTNLVRMAEGKAPKMTVEV 1317

Query: 1409 ASTTVDP---TKSPLSGHYHEIPEGTKMPSGIDIVRDGSDVIPNSP 1451
             S   D     +  L  H+++IP+      G   V D S+++  +P
Sbjct: 1318 ISRKTDKISIREYALELHHNDIPQRV----GGAGVHDSSNLLALTP 1359