Pairwise Alignments

Query, 263 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 260 a.a., L-lysine and D-lysine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

 Score =  276 bits (706), Expect = 3e-79
 Identities = 141/260 (54%), Positives = 184/260 (70%), Gaps = 2/260 (0%)

Query: 1   MTTPVSPTAGRPLPPKDDTMILFSDINKWYGDYQALADINAEVKKGEVVVVCGPSGSGKS 60
           MT P+S     P P     +I    +NK YG +  L DI+ +V++GE +V+CGPSGSGKS
Sbjct: 1   MTAPLSLATLAPEPDPRPVLIRIEGLNKHYGAFHVLRDIDLQVREGERIVLCGPSGSGKS 60

Query: 61  TLIRTVNRLEEVKSGQLLFDGHDIHAPMGSAALNRLRSRIGFVFQSFNLFPHLSVLENIM 120
           TLIR +NRLE  + G +  DG D+ A    AA  ++RS IG VFQ FNLFPH+SVL+N +
Sbjct: 61  TLIRCINRLEVAQQGSIQVDGIDLAATTREAA--QVRSDIGMVFQHFNLFPHMSVLDNCL 118

Query: 121 LSPMRVLGVKRADAKTKAGQLLERVGLSSKAGAYPAQLSGGQQQRVAIARALAMEPPAML 180
           L+P  V G+ R DA+ +A   L +VG+ S+A  YP+QLSGGQQQRVAIARAL M+P  ML
Sbjct: 119 LAPTSVRGLSRKDAEERARMYLSKVGIESQAHKYPSQLSGGQQQRVAIARALCMKPRIML 178

Query: 181 FDEPTSALDPEMVGEVLSVMRGLAHDGMTMMCVTHEMNFAREVADRIWFMDAGRILEKAD 240
           FDEPTSALDPEMV EVL V+  LA  GMTM+CVTHEM FAR+VA+R+ F++ G+I+E + 
Sbjct: 179 FDEPTSALDPEMVAEVLDVLVQLAGTGMTMLCVTHEMGFARQVAERVLFLEGGQIIEDSP 238

Query: 241 PETFFRSPQHPRAQRFLSDL 260
           P+ FF  P+  RA+ FL+ +
Sbjct: 239 PQVFFNQPRTERAKAFLAQI 258