Pairwise Alignments

Query, 280 a.a., Glutamine ABC transporter, substrate-binding protein GlnH from Variovorax sp. SCN45

Subject, 261 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 92.4 bits (228), Expect = 9e-24
 Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 23/257 (8%)

Query: 9   LATIGACLGAASLLAHADQWSDISQRKELRCGTFADVPPFAA--PDPKTREMVGHDVDLC 66
           L  + A L  +   A A+   DI  R  L+     D PPF +  PD K R   G D+D  
Sbjct: 9   LTALFASLMLSQAPAQANGLDDIVARGTLKVAVPQDFPPFGSVGPDMKPR---GLDIDTA 65

Query: 67  NAVAKELGLVAKITPLSVEARVPEVKLGRVDVTIANLAYTKSRGEQIQFSD---PYYVA- 122
             +A +L +  ++TP++   R+P +  G+VD+ I++L     R + I FS    P+Y+A 
Sbjct: 66  KLLADQLKVKLELTPVNSTNRIPFLTTGKVDLVISSLGKNAEREKVIDFSKAYAPFYLAV 125

Query: 123 --KEMLAVKASDPGTTKADFKGKRLSSTKGSTSEMSIKMNGSEPVT---FQDTGSAFMAV 177
                 A+ ++D      D KGK +S T+G+  ++ +     +  T   F+D  S   A 
Sbjct: 126 FGPPEAAISSTD------DLKGKTISVTRGAIEDIELTAVAPKEATIKRFEDNNSTIAAY 179

Query: 178 QQNKSVGMVANTMTITKLVNQSKTGGVALKMIADPMVLQPVGIGMKKDEPALLAKVNGAL 237
              +   + +  + +  +  +S     ALK+    +   PV +G+ K+EPALL KVN  L
Sbjct: 180 LAGQVDLIASGNVVMVAISERSPKRVPALKV---KLKDSPVYVGVNKNEPALLEKVNQIL 236

Query: 238 YALEKSGELDRIWAKWL 254
            A +  G L++   +WL
Sbjct: 237 VAAKADGSLEKNAMQWL 253