Pairwise Alignments

Query, 280 a.a., Glutamine ABC transporter, substrate-binding protein GlnH from Variovorax sp. SCN45

Subject, 258 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 99.8 bits (247), Expect = 6e-26
 Identities = 74/256 (28%), Positives = 127/256 (49%), Gaps = 15/256 (5%)

Query: 6   VFRLATI--GACLGAASLLAHADQWSDISQRKELRCGTFADVPPFAAPDPKTREMVGHDV 63
           +F++ T+   A + AA LLAHAD+ +DI  +  +R  T  D  P+   D   +   G DV
Sbjct: 1   MFKMKTLFAAALVCAAPLLAHADKLADIKAKGAIRIATTIDAAPWGFTDAAGKP-TGLDV 59

Query: 64  DLCNAVAKELGLVAKITPLSVEARVPEVKLGRVDVTIANLAYTKSRGEQIQFSDPYYVAK 123
           +L   VAK +G+  ++  ++   R+P +   +VDV IA L  +  R +Q+ FS PY  A 
Sbjct: 60  ELAENVAKAMGVKLELQQVTGANRIPYLLSNKVDVVIAALGSSPERAKQVAFSKPY--AA 117

Query: 124 EMLAVKASDPGTTK----ADFKGKRLSSTKGSTSEMSIK--MNGSEPVTFQDTGSAFMAV 177
             L V     GT K    +D  G+ ++  KGST ++S+     G++ +  +DT S   A 
Sbjct: 118 VYLGVYGG-KGTPKFAKVSDLAGQTVAVPKGSTPDLSLSELAPGAKLIRLEDTASTISAF 176

Query: 178 QQNKSVGMVANTMTITKLVNQSKTGGVALKMIADPMVLQPVGIGMKKDEPALLAKVNGAL 237
              ++     N     K+ +++   G+ +K +   + + P  + ++  E ALLA++N  +
Sbjct: 177 LSGQAPLFAENNFIAQKVADENPAKGIEMKSL---IRISPAYMAVQPSETALLAEMNKII 233

Query: 238 YALEKSGELDRIWAKW 253
            A    G L  +  KW
Sbjct: 234 DAQAADGSLAALRLKW 249