Pairwise Alignments

Query, 280 a.a., Glutamine ABC transporter, substrate-binding protein GlnH from Variovorax sp. SCN45

Subject, 267 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  102 bits (253), Expect = 1e-26
 Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 11/249 (4%)

Query: 12  IGACLGAASLLAHADQWSDISQRKELRCGTFADVPPFAAPDPKTREMVGHDVDLCNAVAK 71
           + A   AA+  A+A   S+I+ R +++ G     PP    D K     G+DVD+ N +  
Sbjct: 16  VAAATLAATTSANAVSLSEITARGKVKIGVLTGAPPMGMVDEKGNPS-GYDVDVANLIGS 74

Query: 72  ELGLVAKITPLSVEARVPEVKLGRVDVTIANLAYTKSRGEQIQFSDPYYVAKEMLAVKAS 131
            L L  ++ PL+  AR+P ++ G+VD  +A LA T  R + + F+ P Y A  M  +   
Sbjct: 75  YLSLPVELVPLTPPARIPALQTGKVDFLVATLAPTGERAKTVMFTQP-YSAFNMDIISGK 133

Query: 132 DPGTTKAD-FKGKRLSSTKGSTSEMSIK---MNGSEPVTFQDTGSAFMAVQQNKSVGMVA 187
           D      D  KGKR+S  +GS+ E +++   + G E V ++D  ++  A+   + V  VA
Sbjct: 134 DQKFENLDSLKGKRVSVNRGSSQETALRKANVEGLEIVVYEDDSTSAQALLAGQ-VDAVA 192

Query: 188 NTMTITK-LVNQSKTGGVALKMIADPMVLQPVGIGMKKDEPALLAKVNGALYALEKSGEL 246
              T+ + ++ Q    G+    +      Q   +  K ++  L   +N ++Y ++ SG+L
Sbjct: 193 LPSTVGEAIIKQRPEAGL---QVGFTFFQQGNSMATKIEDFELRQWLNTSIYLMKMSGDL 249

Query: 247 DRIWAKWLG 255
           DRI  KW G
Sbjct: 250 DRISVKWTG 258