Pairwise Alignments

Query, 227 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 219 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 88.2 bits (217), Expect = 1e-22
 Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 11  LVVEADPAVARRMLRILGALAPGRHAPCVSTPEEAHHLLAAFSF---DLVFVDMQLQPTG 67
           L++  D A+ R  +R L    PG     V    +   LL  FS    D+V +D+ ++ TG
Sbjct: 5   LLLVDDHALIRAGVRALVQDIPGYTV--VGEASDGAQLLERFSALLPDIVLLDLSMKHTG 62

Query: 68  EGARLITRIRVAQPRSQVVAISHMDNRDLVRSAFAAGATGYLLSDAEDAEIAYALRALES 127
            G   + +++ A P+S+V+ +S   + +L+  A  +GA GYLL D    E+ +AL AL +
Sbjct: 63  -GLDALQQLKRAYPKSRVLILSMHTDPELIMCALESGAHGYLLKDTTANELEHALLALRN 121

Query: 128 GGVALDPRVGRRVLDMLAVSMRRGTVTAPLDAAEAPRQLRPRELQFLRLIADGLSNRQIA 187
               L P +   V++   V  +      P   A     L  R+L+ LRLI  G S R+IA
Sbjct: 122 NERYLSPAIAHTVINQALVRSQ-----GPTPPAGHSHNLTARQLEILRLIVRGKSTREIA 176

Query: 188 DALEVSIHTVEFHARNAYRKLEVKSRTQAILEATRHGLL 226
             L +SI TVE H     ++L++      +L A R  ++
Sbjct: 177 HGLGLSIKTVEAHRSQIMKRLQIFDVAGLVLFAVREQII 215