Pairwise Alignments

Query, 227 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

 Score = 80.9 bits (198), Expect = 2e-20
 Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 11  LVVEADPAVARRMLRILGALAPGRHAPCVSTPEEAHHLL---AAFSFDLVFVDMQLQPTG 67
           L++  D ++ R  +R L    PG     V   ++ + LL      + D++ +D+ ++ T 
Sbjct: 5   LLLVDDHSLIRAGVRALVCDIPGYDV--VGEADDGNQLLDQVRTLAPDIILLDISMRSTS 62

Query: 68  EGARLITRIRVAQPRSQVVAISHMDNRDLVRSAFAAGATGYLLSDAEDAEIAYALRALES 127
            G   +T++R +    +V+ +S   + DL+  A  +GA GYLL D    E+  AL A+  
Sbjct: 63  -GLDALTQLRASGSTCKVLILSMHTDPDLIMRALESGAHGYLLKDTSATELEQALGAVRH 121

Query: 128 GGVALDPRVGRRVLDMLAVSMRRGTVTAPLDAAEAPRQLRPRELQFLRLIADGLSNRQIA 187
           G   L P +   V++      ++G       +A     L  R+L+ LRLI  G S R+IA
Sbjct: 122 GERYLSPAIAHTVINQALRHTKQGK-----PSAGERHNLTSRQLEILRLIVRGKSTREIA 176

Query: 188 DALEVSIHTVEFHARNAYRKLEVKSRTQAILEATRHGLL 226
             L +SI TVE H     ++L++      +L A R  ++
Sbjct: 177 AGLGLSIKTVETHRSQIMKRLQIHDVAGLVLFAVREKII 215