Pairwise Alignments

Query, 1361 a.a., T6SS component TssM (IcmF/VasK) from Variovorax sp. SCN45

Subject, 1267 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 7e-17
 Identities = 100/412 (24%), Positives = 173/412 (41%), Gaps = 35/412 (8%)

Query: 51  LRSSFRQAVELIEGNIAS----RADRYGIPWIMLLNEGDDHRQLPIEQSGVASALSTESA 106
           LR   + A+ ++  + ++    +A    +PW +++      +   +  SG++++++T + 
Sbjct: 93  LRERLKHAITMLRTDRSAGGGGKAALSDLPWYLVVGMSAAGKTSLLTHSGLSASIATAND 152

Query: 107 SAAATQGISWHFFDRGVVIDIQGAYLGSPDDDDASEKPWDEFLGMCRAYRPQRPFDSVVI 166
           S + TQ   W+F    V+ID  G YL   DD  ASE  +  FL M R  R +   + +V+
Sbjct: 153 SESGTQHCDWYFSPDAVMIDTAGRYL--RDDQSASE--FSAFLRMLRKQRGKAAINGLVL 208

Query: 167 TIPAALLLDESTDGRLELSKRAKLAHRRLWLAQNRFAMRFAVYVLITGAEQLEGFSAFAR 226
            +    LL  ++D R  L+  A+L  R    A+   A    VY++++  +QL GFS    
Sbjct: 209 VVSLPELLAANSDERNALA--AQLVARVEEYAECLDA-NPPVYLMLSKTDQLPGFSQAFD 265

Query: 227 ALPEPLRASMLGWSSPYDLSTTYQPGWVDEAVGTVVRSV-----SDVSAELFATDTSPQG 281
            L    R   LG +  + LS     G +   + T ++ +       V A++ A     + 
Sbjct: 266 GLDLHERQQPLGMT--FGLSEIRTNG-LHAVLQTRLKKLQAHIRQHVDAQMIA--LGAEA 320

Query: 282 AGPQLLLPSRIEALRGQLQLYVDELMRPSAYHEPFFFRGIYLTGDAGESAQAVAAI--DA 339
               L  P    AL G L+ +++   R      P   RG+Y T  A ++ Q +  +  D 
Sbjct: 321 DSTLLNFPQYFAALSGVLEQFLEHFTRGHRGGAPLLLRGLYFT-SALQNGQQLGQVYEDV 379

Query: 340 EHDAYG-RKDLEPIGGDLIAQLMRQPAFLRDLFEKKIFLEYGLTRPSRTQTLARPVLHRA 398
             D +  +   +   G +   L  +  F+ D F + IF       P R   L +  L R 
Sbjct: 380 IADEFALQAAYDEQAGHVGKALGNRSYFITDTFRQVIF-------PDRDLILYQSRLGRQ 432

Query: 399 LRWTAVIFLGGWGIGLVVATWQ---LHRHNSTLVSALSQLQHDAQYRMRAQQ 447
             ++ ++       GL+   WQ      +   L S   QL H  Q   R QQ
Sbjct: 433 AAFSPLLLGLAAATGLLFIGWQALSFANNRQWLDSLRGQLAHIEQAADREQQ 484