Pairwise Alignments

Query, 440 a.a., T6SS component TssK (ImpJ/VasE) from Variovorax sp. SCN45

Subject, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 94/323 (29%), Positives = 138/323 (42%), Gaps = 35/323 (10%)

Query: 8   DRVEWHEGMLLSPQHFQQFSARMDSLVAWQTLAAAPFSWGVRRLVFDHGLLPTGMLRVLA 67
           +RV W EGM +  QHFQQ    +++L+  ++   +  SWG   L+ D GLL  G L +++
Sbjct: 5   NRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGSWGFSELLIDQGLLAQGKLAIVS 64

Query: 68  LEAILPDGTAVQYSAAEAAHGTLELSLAPHADQLANEPLDIYLTLPV----------TGP 117
              +LPDGT       + A   L +      D    + L +YL LP+           G 
Sbjct: 65  ARGLLPDGTPFNIPQDDLAPSPLNI------DDNLRDGL-VYLALPLKRAGARDTVDEGE 117

Query: 118 ARHRAATV-RFRSVA--GAPVEDAVSDAEPANIPRMLPRLALSAGAVPPGTHVHLRLGQV 174
           A   A  V + R V    AP E+    A  A   R L  L    G         +R+ + 
Sbjct: 118 ALEAARYVSQVREVRDDNAPFENRAPVAVGA---RALRLLTAQDGISDYAAIGLVRIKEK 174

Query: 175 FKDNEVVKLGDAQPPLLEVARDNPLWTAAAALLGQL--RGK--AAFVAKQTAVPSSRVDD 230
             D  +V      PP+L+VA   PL    + LLG L  RG+  A  V    A  +S + D
Sbjct: 175 RADRALVLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIAD 234

Query: 231 RLAHLELKDRLRSLLSGLPHAEAVLRTPHLHPLPMYWSLCALLASLSLLRPGGLPPVPM- 289
            +  L+L +R + L+  L           LHP   +  L +L    S     G  P    
Sbjct: 235 FML-LQLVNRAQPLIQHLSQLSP------LHPERFFSELVSLAGEFSTFSTSGRRPQEYP 287

Query: 290 DYDHANPSLVFQPLLLALRDAVS 312
            Y H + +L F P++ ALR+A+S
Sbjct: 288 QYQHDDLALSFAPVMAALREALS 310