Pairwise Alignments

Query, 350 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 249 a.a., Glutamine ABC transporter, substrate-binding protein GlnH from Variovorax sp. SCN45

 Score = 52.8 bits (125), Expect = 9e-12
 Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 14/174 (8%)

Query: 111 IARIVMRGELVVAMLKVDTPPFFFFDDSGQWTGLEVGLAQSLAKELGVKLRFNRDASTFN 170
           IA     G L+VA+     P  F F +  ++ G ++ L  ++AKEL  KL +      FN
Sbjct: 19  IAPATAAGPLLVAVDTAFVP--FEFKEGDKYVGFDIDLWDAVAKEL--KLDYKLQPMDFN 74

Query: 171 AVVDLLASGQADLAISKLSRTLARTQTIAFSDAYLTLNHSLIL-NRVKFAQISHGRPLPE 229
            ++  L +   D+A++ ++    R + I FSD Y      L++    K A ++  +    
Sbjct: 75  GILPALQTKNVDVALAGITIKEERKKVIDFSDGYYDSGFILMVPTASKIAGVADLK---- 130

Query: 230 VIRNFNGSIGVIAKSSFADYARTNFPHAKIQEFATWNEVLAALHKGEIVSAYRD 283
                  ++ +   +S ADYA+ NF   ++++F   +     L  G + +A  D
Sbjct: 131 -----GKTLAIKTGTSAADYAKANFAGTELRQFPNIDNAYLELMTGRVDAAMHD 179