Pairwise Alignments

Query, 350 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 10/201 (4%)

Query: 130 PPFFFFDDSGQWTGLEVGLAQSLAKELGVKLRFNRDASTFNAVVDLLASGQADLAISKLS 189
           PPF F D++G+ TG EV L++ LAKELGVK +     + ++ ++  L S + D+ +++++
Sbjct: 49  PPFSFQDENGKLTGFEVELSELLAKELGVKAKI--QPTKWDGILAALESKRLDVVVNQVT 106

Query: 190 RTLARTQTIAFSDAYLTLNHSLILNRVKFAQISHGRPLPEVIRNFNGSIGVIAKSSFADY 249
            +  R +   FS+ Y       ++ + K  Q++    +          +GV   +++  +
Sbjct: 107 ISEERKKKYDFSEPYTVSGIQALILKKKAEQLN----IKGAQDLAGKKVGVGLGTNYEQW 162

Query: 250 ARTNFPHAKIQEFATWNEVLAALHKGEIVSAYRDEFEVKRVLKADPTVSLVLRTVTLKDL 309
            + + P A ++ +       A L  G I +   D         A       L       L
Sbjct: 163 VKKDVPQADVRTYEDDPSKFADLRNGRIDAILIDRLAALEY--AQKAKDTELAGDAFSRL 220

Query: 310 EDTLGIGVAVTDPTLLAYVNQ 330
           E   G+ +   +P LLA +N+
Sbjct: 221 ES--GVALRKGEPELLAAINK 239