Pairwise Alignments

Query, 913 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

Subject, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

 Score =  512 bits (1318), Expect = e-149
 Identities = 323/884 (36%), Positives = 482/884 (54%), Gaps = 65/884 (7%)

Query: 9   LGRLNPECKRAMEQAAELCVQQTHYNVDLEHLLLKLVDNDAPDLRLVFGRFSIRPDTVQS 68
           + RL  + + A+  A  L V   H  ++  HLL  L++     ++ +  +     + ++ 
Sbjct: 3   IDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQ 62

Query: 69  QLQKSLDTFKRGNGRTP--SLAPDFAPLFQEAWLMSSMLLGQQHIRSGTLMLALLDVDRL 126
            L K LD   +    T   +++ D A L  +A  ++    G Q I S  ++LA +D +  
Sbjct: 63  GLVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQK-GDQFISSELVLLAAMDENSK 121

Query: 127 RGRLVDAAPALLQIPRGTLRDELAGLLQSSPEDAAASALAAAPVAPAPAASQHNPPNTPS 186
            G+L+        + +G  +  L   + +    AA +                       
Sbjct: 122 LGKLL--------LSQGVSKKALENAINNLRGGAAVN----------------------- 150

Query: 187 LPDAGAPPLQMPTARRGSSATPSLDQYTVDMTQLARDGAIDPIRGRDGEIRQIIDVLLRR 246
             DA A             +  +LD+YTVD+T+ A +G +DP+ GRD EIR+ + VL RR
Sbjct: 151 --DANA-----------EESRQALDKYTVDLTKRAEEGKLDPVIGRDDEIRRTVQVLQRR 197

Query: 247 RQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALLQAGAGVKGEFEN 306
            +NNP+L GE GVGKTA+ EG AQR++ G+VP  L+   + +LD+  L AGA  +GEFE 
Sbjct: 198 TKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEE 257

Query: 307 RLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALARGELRTIAATTWA 366
           RLKS++ E+      +ILFIDE H ++GAG  EG  DA N+LKPALARGEL  + ATT  
Sbjct: 258 RLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLN 317

Query: 367 EYKKYVERDPALARRFQVVKVEEPSEEVAIDMLRGMVETLEKHHGVEIIDDAVREAVKLS 426
           EY++++E+D AL RRFQ V VEEPSEE  I +LRG+ E  E HH V I D A+  A KLS
Sbjct: 318 EYRQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLS 377

Query: 427 HRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESELRVLRHEAATGG 486
           HRYIT RQLPDKAI ++D A +R+ +  +  P  L+   R +   + E + L+ E     
Sbjct: 378 HRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAA 437

Query: 487 EHQDAIATLTAKLDALRQKHKRLSDKLDEEKHAVMEIVALRRKIADSLRDDAPPPDEEND 546
           + +  +  LT +++ L +++  L +    EK  V     +++KI  S R +      + D
Sbjct: 438 KKR--LEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQS-RQELEAARRKGD 494

Query: 547 ----PALLTAALRRLEKGLEAL----QSDEPMVPVCVDGVMVAEVISGWTGIPVGKMMTD 598
                 L    +  LE+ L+ +    ++D  ++   V    +AEV+S WTGIPV KM+  
Sbjct: 495 LNRMAELQYGVIPDLERSLQMVDQHGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLEG 554

Query: 599 ELHTVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFMLVGPSGVGKTET 658
           E   +L ++E L +RV+GQ +A+ A+A  VR  RA L DP +P G F+ +GP+GVGKTE 
Sbjct: 555 EREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTEL 614

Query: 659 AFALADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLTEAVRRRPYSVV 718
             ALA+ L+  E  ++ ++MSEF E H+V+ L GAPPGYVGY  GG LTEAVRR+PYSVV
Sbjct: 615 CKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 674

Query: 719 LLDEMEKAHPDVLELFFQVFDKGTMEDGEGVQIDFKNTLILLTSNAAQDVITQASQGGRR 778
           LLDE+EKAHPDV  +  QV + G + D  G  +DF+NT+I++TSN     I Q   G R 
Sbjct: 675 LLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQI-QELVGDRE 733

Query: 779 PDPEELVERLRPELLKQFSPAFLGRL-ALVPYHHLGDEQIRSIVNLKLGKLARRFALNHH 837
                +++ +       F P F+ R+  +V +  LG EQI  I  ++LG+L  R  L   
Sbjct: 734 AQRAAVMDAVG----AHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRL-LERE 788

Query: 838 AIFTWDEQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVL 881
              +   +  D + A   +   GAR +   +   +   L++ +L
Sbjct: 789 LSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLIL 832